Pairwise Alignments

Query, 297 a.a., nitrate ABC transporter permease from Agrobacterium fabrum C58

Subject, 312 a.a., nitrate ABC transporter permease from Dickeya dianthicola 67-19

 Score =  236 bits (601), Expect = 6e-67
 Identities = 123/273 (45%), Positives = 174/273 (63%), Gaps = 5/273 (1%)

Query: 16  AVQKANVVALSPKHLPRIDLRKWGAAAARNTIPPLVVLAVLLGVWQLLCSAPGSSLPPPS 75
           A + A   A+ P+ + R  L +W        +P  V + +LL VWQ+  +      P P 
Sbjct: 38  APEPAAPTAVLPRAVWRPRLSQW----LSRLLPGGVGMILLLAVWQV-AALSSKGFPTPW 92

Query: 76  QVFEESYDLIVSPFFHNGSQDIGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSVWAM 135
           Q +  +  +   PF+  G  D G+G  VL SLERV  GFGLAA+ GI  G +IG+  +  
Sbjct: 93  QTWLAAQSIFADPFYVAGPNDQGIGWNVLASLERVGIGFGLAALVGIPAGFLIGRFRFMA 152

Query: 136 RGLDPIFQVLRTVPPLAWLPLSLAAFQDSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195
              +PI  +LR V PLAWLP+ L  FQ + P++ + IFI SIWP+I+NTA GVR IPQDY
Sbjct: 153 AMFNPIVSLLRPVSPLAWLPIGLLLFQRAEPASSWTIFICSIWPMILNTAEGVRQIPQDY 212

Query: 196 RNVAKVLRLNQLEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGVGIGFFIWD 255
            NVA+VL+L++     KI+LP+  P + TG+R+ IG++WL IVAAEMLTGG+GIGF+IW+
Sbjct: 213 LNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGIAWLVIVAAEMLTGGIGIGFWIWN 272

Query: 256 AWNSSRLPDIIVALAYIGVVGFMLDKLVAALGK 288
            WN+  +P+II+A+  IGVVG +L++ +  L K
Sbjct: 273 EWNNLNVPNIIIAILVIGVVGLLLEQGLMLLAK 305