Pairwise Alignments

Query, 297 a.a., nitrate ABC transporter permease from Agrobacterium fabrum C58

Subject, 325 a.a., nitrate ABC transporter permease from Dickeya dadantii 3937

 Score =  237 bits (605), Expect = 2e-67
 Identities = 123/277 (44%), Positives = 174/277 (62%), Gaps = 5/277 (1%)

Query: 12  PQQPAVQKANVVALSPKHLPRIDLRKWGAAAARNTIPPLVVLAVLLGVWQLLCSAPGSSL 71
           P+   V      A+ P+ + R  L +W        +P  V + +LL VWQ+  +      
Sbjct: 47  PETAGVAAPTPAAVLPRAVWRPRLSQW----LSRLLPGGVGMILLLAVWQV-AALSSKGF 101

Query: 72  PPPSQVFEESYDLIVSPFFHNGSQDIGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQS 131
           P P Q +  +  +   PF+  G  D G+G  VL SLERV  GFGLAA+ GI  G +IG+ 
Sbjct: 102 PTPWQTWLAAQSIFADPFYVAGPNDQGIGWNVLASLERVGIGFGLAALVGIPAGFLIGRF 161

Query: 132 VWAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDSNPSAIFVIFITSIWPVIINTAVGVRNI 191
            +     +PI  +LR V PLAWLP+ L  FQ + P++ + IFI SIWP+I+NTA GVR I
Sbjct: 162 RFMAAMFNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWTIFICSIWPMILNTAEGVRQI 221

Query: 192 PQDYRNVAKVLRLNQLEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGVGIGF 251
           PQDY NVA+VL+L++     KI+LP+  P + TG+R+ IG++WL IVAAEMLTGG+GIGF
Sbjct: 222 PQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGGIGIGF 281

Query: 252 FIWDAWNSSRLPDIIVALAYIGVVGFMLDKLVAALGK 288
           +IW+ WN+  +P+II+A+  IGVVG +L++ +  L K
Sbjct: 282 WIWNEWNNLNVPNIIIAILVIGVVGLLLEQGLMLLAK 318