Pairwise Alignments

Query, 288 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 319 a.a., Lactose transport system permease protein LacF from Xanthobacter sp. DMC5

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 60/247 (24%), Positives = 121/247 (48%), Gaps = 11/247 (4%)

Query: 47  WAGTQWFQEILSSDRFWNALGRNLVFSGIILAIEIPLGIFIALKMPKSGIGVPICL---V 103
           + G   +++++  + FW A+    ++S +   I++  G+ +AL +     GVP      V
Sbjct: 72  FVGLANYRDLMGDETFWVAVRNTFIWSFVAPVIDVATGLLLALALYA---GVPFARFLRV 128

Query: 104 TMALPLLVPWNVVGTIWQVFGRSDIGLLGYYANQLGLD---YNYVNDPVDAWITVVIMDV 160
               P+L+ + VV  +W      D G+L      +GL     +++ DP  A   V++   
Sbjct: 129 AWFTPVLLSYVVVAILWMWIYNYDWGVLNVMLRAVGLGDLASSWLGDPNLALAAVIVTHA 188

Query: 161 WHWTSLVVLLCYASLVSIPDAYYQAARIDGASRFAVFRFIQLPKMKRVLLIAFLLRFMDS 220
           W W    +++C A++ S+P    +A+ +D     A  R+I +P ++  LL  ++L F+  
Sbjct: 189 WKWAGFNMVVCLAAIHSLPKEVLEASDLDNCGWGAKLRYIIIPMLRPTLLSLYILSFIGK 248

Query: 221 FMIYTEPFVVTGGGPGNSTTFLSIDLVKMAL--GQFDLGPAAAMSLIYFLIILLLSWVFY 278
             ++   +++T GGP  +T  +S  + K A     FDLG  +A++ ++FL++     +  
Sbjct: 249 MKVFDLVWIMTQGGPLWATETVSTYVYKRAFNWNTFDLGYPSAIATVWFLVVCAAVIILN 308

Query: 279 TVMTSHD 285
            V+ S +
Sbjct: 309 RVLGSRE 315