Pairwise Alignments

Query, 337 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 309 a.a., ribose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 78/331 (23%), Positives = 130/331 (39%), Gaps = 44/331 (13%)

Query: 6   KSTAAAGVLAVAMSAAATAPATAAGKFACEPGETYVMNVMVSSHPYWVPVFEGFKQAAKA 65
           K T  AGV A+  SA       A  K  C     YV      SH Y  P  +     AK 
Sbjct: 3   KKTLFAGVAALIASAGF-----AEAKTVC-----YV--TAADSHAYVTPANKAIDARAKE 50

Query: 66  LGCEAVFTGTPEYDITKQIASFEQELVKKPKGILLHPMQADPFIEPINKAIASGVSVTTF 125
           LG E V + +  +D+   +      + +K  GI+L P+    +I  + KA A+G+ V   
Sbjct: 51  LGVE-VLSLSQNFDVQTGVQQINTCIARKAAGIILWPLDPQAYIPGLAKAKAAGIPVNLI 109

Query: 126 AA---DSPKSKRTAYITSDNVAEAKFAADEIVKKLGEKGEYAVLENPGQSNHDLRV---- 178
            +   D+ K   T++   D  +E + AA+ + K L  KG   ++   GQ+ +   +    
Sbjct: 110 NSPMNDAAKPFVTSFTGPDVYSEGEMAAEALQKALDGKGSIVII--AGQAGNGTTIGRVD 167

Query: 179 --TALVDYMGRTYPQMKLVGRQATNQDANVAYQAVGALLQANPNLGALWIPEAGSAEGAT 236
              A +  +G     +  V      Q A VA + +  + +    +  ++  +   A G  
Sbjct: 168 GFNAKLKALGSKIEVLDTVNADFDQQKALVASRDL--ITRFGDKIAGVYANDDTMARGFI 225

Query: 237 TAVLEAKKKVL---ILHADITPATLEHIKQGNIYMSINPNQGVQGFMGFMNTFLGAHSDL 293
            A  EAK       I+  +      E I+ G +Y +I  +    G +        A + +
Sbjct: 226 DAWKEAKSGKATPPIVGINGQKDAFESIRNGEMYATIVQSPIEDGLL--------AINAM 277

Query: 294 IDPFNDYKVSGFNPMQVPSMDNGFAVITKAN 324
            D  N  K+    P+ +        V+TKAN
Sbjct: 278 ADVLNGKKIDARLPIPL-------TVVTKAN 301