Pairwise Alignments

Query, 333 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  175 bits (444), Expect = 1e-48
 Identities = 118/313 (37%), Positives = 165/313 (52%), Gaps = 19/313 (6%)

Query: 36  ILALFTVMSFISPYFLTVDNLRAMAMVFAIESIVVVGMTILLISGGIDLSVGSVTALAMV 95
           + AL  V S  S  F TV+N   +A+     +++ +G T ++I+GGIDLSVGSV ALA V
Sbjct: 30  LFALVAVFSATSNAFFTVNNGMTIALQVTSIALLGIGATCVIITGGIDLSVGSVLALAGV 89

Query: 96  AAGWLFLN-GVDPWVAAGLAICLTTLVGMAMGFLTTVVGLHHFIVSLGVMVIARGVCLLA 154
            A       G+   +   L I   +L G+  G L T   L  FI +LG+M+IARGV L  
Sbjct: 90  VAALAVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIATLGMMLIARGVALQI 149

Query: 155 TGGRPLGLYSLPPEFKFIGQGAL----------------GGIPLVLIIFLVVVVVFDLLL 198
           TG R +    L   F  +G GAL                 GIP  +I+ +V+ +    +L
Sbjct: 150 TGARAVS--GLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVILMVVIALAVSFML 207

Query: 199 RRTTAFRKVFYTGSNPKAAAYSGIRVGRVVFATTTLCSMLCGVAGVIYMARFGSAQPSFG 258
            R+   R ++  GSN  AA  SG+ V RV   T  L   L G+ G + M+R  +AQP+ G
Sbjct: 208 NRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCVLMSRLVTAQPNEG 267

Query: 259 VGMELNVIAAAVIGGASLSGGSGTILGAILGAILLSVVSSSLALLNVSVYWQDIIRGSIL 318
           V  EL+ IA+AVIGG SL GG GTI G  +GA ++ ++ + L +  VS + Q II G ++
Sbjct: 268 VMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNGVSAFTQQIIIGLVI 327

Query: 319 LAAVLFDHYLVRR 331
           L  V  D    RR
Sbjct: 328 LVTVWIDQLRNRR 340