Pairwise Alignments

Query, 493 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 626 a.a., putative ABC efflux transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  188 bits (477), Expect = 5e-52
 Identities = 127/463 (27%), Positives = 220/463 (47%), Gaps = 17/463 (3%)

Query: 3   ALNMREGLAKDMVDQWLKPGRAARLAGFGTISINPDQRLHDDVRNLAESSTALSIGLVNA 62
           ++  R  L + +   W++     R         NPDQR+  DV     +S +L++G V+A
Sbjct: 153 SIKWRVWLTERLTHDWMQGDAYYRGQFLAEPVDNPDQRIELDVNAFVTNSVSLALGAVSA 212

Query: 63  TIILVSFIGVLWSLSAGFAITISGNTYAIPGYMVWAAIFYAGSASLLSNLVGYRLVGLNA 122
            + LV+F G+LW LSA   +T++G    IP  MV+A   Y   A+ ++  +G  L+ LN 
Sbjct: 213 LVSLVAFTGILWGLSA--PLTVAG--VEIPRAMVFAVYLYVIIATWVAFRLGRPLIRLNF 268

Query: 123 ERYSKEAELRFSLMRASENLAAIALARGEKNERRRIGIDIDAVLGVIRGLAMALTHLTWV 182
                 A  R++LMR  EN   IA  +G + ER  +     A++  +  L       +  
Sbjct: 269 LNEKLTANFRYALMRLRENAENIAFYQGAQVERGTLLGRFAALIVNVWALVYRNLKFSGF 328

Query: 183 SAGYGWLAVVAPILIAAPVYFSGNLTFGGLMMAVGAFNQVNTALRWYIDNFGPIASWKAT 242
           + G   +AVV P ++ AP +FSG +  G +M    AF QV  +L ++ +++   A ++AT
Sbjct: 329 NLGVSQVAVVFPFILQAPRFFSGAIKLGDVMQTSQAFGQVQDSLSFFRESYDAFAQYRAT 388

Query: 243 LQRVSVFRNALIQMDSVEQHGLAIDLQRSVENEKIRLQSVIICRDAGGQDVERGFRLREN 302
           L R++ F      +D+ +Q      +    +   +++  + + R  G         + + 
Sbjct: 389 LDRLTGF------LDANQQASALPRVTTEDQAHALQITGLQVLRPDGHA------LIADL 436

Query: 303 EVGIGPGERLMINGEQGVNRRLLFAAMAGLWPWGQGRIEMPEQSDTLFIAQHGYLPAGSL 362
           ++ +  G+ L+I G  G  +  L  A+AGLWP+ +G++  P     LF++Q  YLP G L
Sbjct: 437 DLSLHAGQALLIKGPSGSGKTTLLRALAGLWPYAEGKVRRPTGHQALFLSQRPYLPLGDL 496

Query: 363 REILAYPRAPQRFTDADYLAALIACGLGEMTSRLDENIRWDKKLDSDEQASIRIANALLL 422
           R ++AYP A     +     AL    L  +  RLD +  W   L   EQ  +  A  L  
Sbjct: 497 RTVIAYPAASNPKDELLMQQALRQVNLAHLAERLDVSCDWSHILSVGEQQRLAFARVLFN 556

Query: 423 KPKFVVIDDLLEGLEKQTQDTLAQVLNG-MEGAAIIYIGRSET 464
           +P+ V +D+    +++  +  L  +L   M  A ++ +G   T
Sbjct: 557 RPQVVFLDESTSAMDEGLEHALYALLRSEMPSALLVSVGHRST 599