Pairwise Alignments

Query, 493 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 409 a.a., peptide antibiotic transporter SbmA from Dickeya dianthicola ME23

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%)

Query: 39  QRLHDDVRNLAESSTALSIGLVNATIILVSFIGVLWSLSAGF-AITISGNTYAIPGYMVW 97
           QR+ +D    A +  +L + LV + + L++F+ VL SLS+   ++ + G    IP  +V 
Sbjct: 189 QRIQEDTMRFASTVESLGVDLVKSLMTLIAFLPVLVSLSSHVKSLPLIGE---IPYGLVI 245

Query: 98  AAIFYAGSASLLSNLVGYRLVGLNAERYSKEAELRFSLMRASENLAAIALARGEKNERRR 157
           AAI ++ + + L  L+G +L GL       EA  R  L+   ++    A    ++     
Sbjct: 246 AAIVWSLAGTSLLALIGIKLPGLEFNNQRVEAAYRKELVYGEDDAGRAAPPTVKQ----- 300

Query: 158 IGIDIDAVLGVIRGLAMALTHLTWVSAG---YGWLAVVAPILIAAPVYFSGNLTFGGLMM 214
                    GV +       H T+ +     Y     V  I++  P   +G+LT G +  
Sbjct: 301 ------LFKGVRKNYFRLYFHYTYFNIARVLYLQTDNVFGIIMLLPSIVAGSLTLGLMTQ 354

Query: 215 AVGAFNQVNTALRWYIDNFGPIASWKATLQRVSVFRNAL 253
               F+QV  + ++ I+++  I    +  +R+  F + +
Sbjct: 355 ITNVFDQVRGSFQYLINSWTTIVELMSIYKRLRSFESVI 393