Pairwise Alignments

Query, 493 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 249 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score = 47.4 bits (111), Expect = 6e-10
 Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 31/171 (18%)

Query: 304 VGIGPGERLMINGEQGVNRRLLFAAMAGLWPWGQGRIEMPEQS------DTLFIAQHGYL 357
           V +  GE   I GE G  +  L  A+AGL  + +G + +  +S      D  F +    +
Sbjct: 25  VDVAEGESFGIVGESGSGKSTLLRAIAGLNHFDEGSLMVAGRSYSSKHRDKSFYSDVQMV 84

Query: 358 ---PAGSLREILAYPRAPQRFTDADYLAALIACGLGEMTSR----LDE-------NIRWD 403
              P GSL         P++  DA  L  L+  GL     R    LDE         R+ 
Sbjct: 85  FQDPYGSLH--------PRQTVDALLLEPLVIHGLDNREQRIARALDEVGLGSGFRFRYS 136

Query: 404 KKLDSDEQASIRIANALLLKPKFVVIDDLLEGLEKQTQDTLAQVLNGMEGA 454
            +L   ++  I IA AL+++PK +++D+    L+   Q   A++LN +E A
Sbjct: 137 HQLSGGQRQRIAIARALIVEPKILLLDEPTSALDASIQ---AEILNLLEQA 184