Pairwise Alignments

Query, 499 a.a., ribose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 513 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  438 bits (1126), Expect = e-127
 Identities = 220/487 (45%), Positives = 329/487 (67%), Gaps = 6/487 (1%)

Query: 12  GISKIFPGVKALSNVNFTVEYGRIHAVVGENGAGKSTLMKILSGSYAPTTGTTEIAGVEV 71
           GI K FPGV AL +V F ++ G +HA++GENGAGKSTLMKIL+G Y P  G   + G  +
Sbjct: 28  GIRKEFPGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEIRLKGAPI 87

Query: 72  QMRRPADAQKLGIRMVHQELNLVPDLTVAENIYLGRMPHRRF-LVDRQAMLRKAAAVLKE 130
           ++  P DA + GI M+HQELNL+  +TVAENI++ R P  R   +D   M R+   +L+ 
Sbjct: 88  RLDSPLDALENGIAMIHQELNLMAYMTVAENIWIRREPKNRLGFIDHGEMYRRTETLLER 147

Query: 131 LEAAIDPKARLGDLPISQQQLVEIAKSYSADPRIIVLDEPTSSLSEHETTALFSILRKMK 190
           L   +DP+ R+G+L ++ +Q+VEIAK+ S +  ++++DEPTS+L+E E   LF I+R ++
Sbjct: 148 LGIDLDPETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEHLFRIIRDLR 207

Query: 191 SQGIAIIYISHRLKEVLDIADDVTILRDGSMIDTRPAAGITAAEMIRLMVGREVANVFPK 250
            +GI I+YI+H++ E+ +IAD+ ++ RDG  I T  +  +T  ++IR+MVGRE+  +FPK
Sbjct: 208 ERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVGREITQMFPK 267

Query: 251 TPSKIGPVAFKVTGLSDGEKFHDVGFDVRSGEILGLTGLVGAGRTEVAQAIFGLAPLATG 310
               IG V   V  L+    FHDV FDVR+GEILG+ GLVG+GR+ VA+ +FG+ P ++G
Sbjct: 268 EEVPIGDVVLSVKNLNLDGVFHDVSFDVRAGEILGVAGLVGSGRSNVAETVFGVTPASSG 327

Query: 311 RIEINGKAVTIGSPAAAVKAGVAYVPEDRKGDGIVPSMSVRENISLPVLRRLSRLGRIGM 370
            I I+GK V+I SP  A+   +A++ EDRK  G +  +++ EN+ + VL+   +    G 
Sbjct: 328 TISIDGKPVSIDSPTTAISHRMAFLTEDRKDTGCLLILNILENMQIAVLQ--DKYVANGF 385

Query: 371 SRDRGLA---AKYTRDFSIVPPDPERRINLLSGGNQQKAIISRWLAAGPKVLILDEPTRG 427
            ++  L+    +  R   +  P    RI  LSGGNQQK +I RW+   P++LILDEPTRG
Sbjct: 386 VQENALSEACEEMCRKLRVKTPHLYERIENLSGGNQQKVLIGRWMLTKPRILILDEPTRG 445

Query: 428 VDVGAKAEIHRIIGELVAGGMAVVMISSELPEVMGVCDRVVVMRDGRASSPIARGDLTEE 487
           +DVGAKAEIH+++ E+   G+AV+MISSE+PEV+G+ DRV+VM +GR +  +AR + T+ 
Sbjct: 446 IDVGAKAEIHKLVCEMARQGVAVIMISSEMPEVLGMSDRVMVMHEGRVTGFLARSEATQV 505

Query: 488 RIMALAT 494
           ++M LA+
Sbjct: 506 KVMDLAS 512



 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 11/228 (4%)

Query: 273 DVGFDVRSGEILGLTGLVGAGRTEVAQAIFGLAPLATGRIEINGKAVTIGSPAAAVKAGV 332
           DV F ++ G +  L G  GAG++ + + + G+     G I + G  + + SP  A++ G+
Sbjct: 41  DVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEIRLKGAPIRLDSPLDALENGI 100

Query: 333 AYVPEDRKGDGIVPSMSVRENISLPVLRRLSRLGRIGMSRDRGLAAKYTRDFSI---VPP 389
           A + ++     ++  M+V ENI +    R     R+G   D G   + T        +  
Sbjct: 101 AMIHQELN---LMAYMTVAENIWI----RREPKNRLGFI-DHGEMYRRTETLLERLGIDL 152

Query: 390 DPERRINLLSGGNQQKAIISRWLAAGPKVLILDEPTRGVDVGAKAEIHRIIGELVAGGMA 449
           DPE R+  LS  ++Q   I++ ++    VLI+DEPT  +       + RII +L   G+ 
Sbjct: 153 DPETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEHLFRIIRDLRERGIG 212

Query: 450 VVMISSELPEVMGVCDRVVVMRDGRASSPIARGDLTEERIMALATGEE 497
           +V I+ ++ E+  + D   V RDG+     A  D+T + I+ +  G E
Sbjct: 213 IVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVGRE 260