Pairwise Alignments

Query, 285 a.a., proline/glycine betaine ABC transporter permease from Agrobacterium fabrum C58

Subject, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 11/223 (4%)

Query: 48  RGLPWWAIFLVFLVLAWFAAKKISLVIMVAVMLFIVGALGLWDLTMQTLALMLIASLISI 107
           +GL  WA  LV L L         LV  + +         L       L L+L +   ++
Sbjct: 17  KGLLGWAAVLVILAL---------LVHWIGIDTIARYRDDLGFYLQAHLVLVLASMAAAL 67

Query: 108 VIGVPIGILLAKSEWARRIT--LPILDVMQTMPSFVYLIPAIMLFGLGKVPAVLATIVYA 165
            +G+P GI L++     +    +   +V  T+P    L  A+ + G+G  PA+ A  + +
Sbjct: 68  AVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAGPAIFALFLAS 127

Query: 166 APPLIRLTDLGIRQVDREVVEAATAFGGSPRQILFGVELPLATPTIMAGLNQTIMMALSM 225
             P++R T  G++ V   + EAAT  G +PRQ L+ VELP A P I+ G+   + + +  
Sbjct: 128 LLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALALNVGT 187

Query: 226 VVVASMIGARGLGEQVLNGIQTLDVGKGLEAGLGIVILAIVLD 268
             +A +IGA  LG  +  GI   +  + L       +LA+VLD
Sbjct: 188 APLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLD 230