Pairwise Alignments

Query, 285 a.a., proline/glycine betaine ABC transporter permease from Agrobacterium fabrum C58

Subject, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

 Score =  210 bits (534), Expect = 3e-59
 Identities = 118/257 (45%), Positives = 165/257 (64%)

Query: 14  INEIVRSLVVNYGYVFKAISQTILQAILFVEWALRGLPWWAIFLVFLVLAWFAAKKISLV 73
           I   V  L  N    F AI+Q +   I  V  AL     + +  +F  LA F  +K +L 
Sbjct: 13  IASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFAALAHFIQRKWALT 72

Query: 74  IMVAVMLFIVGALGLWDLTMQTLALMLIASLISIVIGVPIGILLAKSEWARRITLPILDV 133
             VA+   ++  LG W  TM+TLA +  A+++ +VIGVP+GIL A          P+LD+
Sbjct: 73  AFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDL 132

Query: 134 MQTMPSFVYLIPAIMLFGLGKVPAVLATIVYAAPPLIRLTDLGIRQVDREVVEAATAFGG 193
           MQT+P+FVYLIP + LFGLG VP +++T+V+A    IRLT LGI  V +E+++A  AFG 
Sbjct: 133 MQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAGKAFGC 192

Query: 194 SPRQILFGVELPLATPTIMAGLNQTIMMALSMVVVASMIGARGLGEQVLNGIQTLDVGKG 253
           S RQ+L  +ELP A P+I AG+ Q IM++LSMVV+A+++GA GLG+ V+N + T D+  G
Sbjct: 193 SRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTADISLG 252

Query: 254 LEAGLGIVILAIVLDRI 270
            EAGL IV+LAI+LDRI
Sbjct: 253 FEAGLAIVLLAIMLDRI 269