Pairwise Alignments

Query, 358 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 371 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  150 bits (380), Expect = 4e-41
 Identities = 111/344 (32%), Positives = 165/344 (47%), Gaps = 12/344 (3%)

Query: 14  FALASCSSE---EPPAEKPLRTVDVVAAEKKPVDRGSVITGEVRARVQTDLSFRVSGKII 70
           FALA+C  +   +P  + PL  V     +   V+  S  TG V ARV++DL FRVSGK++
Sbjct: 17  FALAACGEKTPSDPRTQAPL--VRAATVQGAGVESRS-FTGTVAARVESDLGFRVSGKVL 73

Query: 71  ERLVDVGARVKTGQLLARIDPEEQKADIDVALANLQSAEAQQTQAQLTFDRQQNLFKTQV 130
           ERLVD G  VK GQ L R+DP + +         + +A A+  Q      R + L  T  
Sbjct: 74  ERLVDAGQTVKRGQPLMRLDPVDLELAARTQQETVAAARARALQTTEDEARYRGLRGTGA 133

Query: 131 TSRSAVDKAQETLLTTQGAVRSAQAQLDTARDALSYTELRADADGVITARNVEVGQVAQA 190
            S SA D+ +      +  + +AQAQ D AR+A  Y  L AD DG++     E GQV  A
Sbjct: 134 ISSSAYDQVKAAADAAKAQLSAAQAQADVARNASRYAVLVADGDGIVMETLAEPGQVVNA 193

Query: 191 AQLVFTLAHDGPRDAVFDVYESLFLERDIDNLVNVSLLSDPAQIVAAPVREISPTIDPDN 250
            Q V  LA  G R+AV  + E+  L   + +    +        + A +R++S T D   
Sbjct: 194 GQTVVRLAQAGQREAVIQLPET--LRPALGSTGLATRFGKEGVSIPATLRQLSNTADRLT 251

Query: 251 GTIRVKVGLNGDM-TMPLGAPVSGHFRFRQI---DAIELPWSAMASQDGAPAVWLVDPRS 306
            T   +  L G++   PLGA V+      Q      +++P  ++      P VW++    
Sbjct: 252 RTFEARYVLEGELAATPLGATVTIQIPDAQAATQGRLQVPLGSLFDAGKGPGVWVIHGEP 311

Query: 307 SEVAMRPVQVADYETGQFVVTEGLNPGDLVVTVGTKFLRAGEKV 350
           ++VA RPV +         VT  +  G+ +V +G   LR GE+V
Sbjct: 312 AKVAWRPVAIQHMGDDAARVTGQIQQGERIVALGAHLLREGEQV 355