Pairwise Alignments

Query, 361 a.a., efflux protein from Agrobacterium fabrum C58

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  100 bits (248), Expect = 1e-25
 Identities = 86/341 (25%), Positives = 159/341 (46%), Gaps = 15/341 (4%)

Query: 33  PVLSVVVEEKLADA---LRLTGTVESRIKTDLGFRVLGRIIARNVDVADLVKKGDVVASI 89
           PV   VV  ++ D     +  GTV +    ++  RV G ++  +      VK GD++A I
Sbjct: 64  PVPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEI 123

Query: 90  DPLALELSVKSAQSDLSNAEAQLANAVTTEQRQRVLAEARSGTEAALEEAEQAMRTANAA 149
           DP    ++++ A+  L+  +AQL NA     R + L    S  +  L+ AE  +      
Sbjct: 124 DPRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGL 183

Query: 150 VAKARANLDKAEEQLGYAQLRAEFDGVVTATSGEIGQVVSAGQT--VVTIARPEVRDVVV 207
           V   +A ++ A   L + Q+RA   G V     ++G +V+A  T  +V I + E  +V  
Sbjct: 184 VKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAF 243

Query: 208 DVPQ----FAAQRLEIGSTFEIAL--QLDPKIHMTGVVREIAPEAETATRTRRTKISLQD 261
            +P+       +R   G++  +    + D K+  TGV+  I  + +T T T + K   ++
Sbjct: 244 TLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFEN 303

Query: 262 APQAFRLGSVVTALALAASEPQITL-PASALLKTDSGWGVWIVNADTATVTYRPVTIDGE 320
              A      V    LA +  Q+ + PA+A+   + G   ++VN + +TV  R + +   
Sbjct: 304 KDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVN-EQSTVNVRKLKVGA- 361

Query: 321 PAEGGSVRITGGIKPGERVASAGVHKLKDGQAIRIDQEVRQ 361
            ++G +  I  G+K G+R+   G  +L++G  + + ++  Q
Sbjct: 362 -SDGENSVILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQ 401