Pairwise Alignments

Query, 1023 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1021 a.a., efflux RND transporter permease subunit from Dickeya dianthicola ME23

 Score =  703 bits (1814), Expect = 0.0
 Identities = 377/1013 (37%), Positives = 603/1013 (59%), Gaps = 8/1013 (0%)

Query: 3    KFNLSDWALEHRSLVWYFMLVFVLAGVFSYLNLGREEDPNFTIKTMVISAQWPGASAEEV 62
            +FNLS  A+  R++  + + +  +AGV ++  LGR EDP FTIK M I   WPGA+A+E+
Sbjct: 5    RFNLSALAVRERAITLFLIFLIFVAGVLAFFQLGRAEDPPFTIKQMTIITAWPGATAQEM 64

Query: 63   ARQVTDRIEKKLEELDNLDHLRSQTVAGRTTIFVELVPETKARNVEPTWVRVRNMIGDIK 122
              QV + +EK+L+EL   D   + T  G     + L        V+  + + R  +GD  
Sbjct: 65   QDQVAEPLEKRLQELRWYDRTETYTRPGLAFTMLSLKDSAPPSEVQEEFYQTRKKMGDEA 124

Query: 123  GEFPSGVVGPFFNDRFGDVYGNIYAFTSDGLSQRQLRDLVEDARAKVLTVDDIGKVDVIG 182
             + P+GVVGP  ND + DV   ++A  + G  QR L    E  R ++L V  + KV++IG
Sbjct: 125  KKLPAGVVGPIINDEYADVTFALFALKAKGEPQRLLVRDAEALRQQLLHVPGVKKVNIIG 184

Query: 183  AQDEAIYLEFSTRQIAALGIDQQSIIKTLQSQNAVTQSGFVNAGPERVALRVSGQFTSED 242
             Q E I++ FS  ++A LG+  Q I   L +QN +T +G +     +V +RV G F + +
Sbjct: 185  EQPERIFVSFSHDRLATLGVTPQDIFAALNNQNVLTPAGSIETKGPQVFVRVDGAFDNLE 244

Query: 243  SLRSINLRVNNRFFPLTEVATIRRGYVDPPSSLFRFNGQPAIGLAIGMKTGANLLHFGEA 302
             +R   +    R   L++VAT+ RGY DP + + R NG+PA+ L + M+   N L  G+A
Sbjct: 245  KIRQTPIVAQGRTLKLSDVATVERGYEDPSTFMVRNNGEPALLLGVVMRDDWNGLKLGQA 304

Query: 303  LDAQMKRVVADLPVGVDVHRVSDQPAVVDEAVSGFTSALFEAIAIVLVISFISLGLRAGM 362
            L+A++  + A LP+G+ + +V+DQ   +  AV  F    F A+ +V+++ F+S+G R G+
Sbjct: 305  LEAEVTNINATLPLGMTLSKVTDQAVNISSAVDEFMVKFFVALLVVMMVCFLSMGWRVGI 364

Query: 363  VVAVSIPLVLAITFVYMEYTGISLQRISLGALIIALGLLVDDAMIAVEMMVARLEVGDDL 422
            VVA ++PL LA  FV M  +G +  RI+LG+LI+ALGLLVDDA+IA+EMMV ++E G   
Sbjct: 365  VVAAAVPLTLAAVFVIMAASGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYSR 424

Query: 423  RKAATYVYTSTAFPMLTGTLVTVAGFIPVGLNNSAAGEFTFTLFVVIAVSLIVSWIVAVL 482
             KA+ Y ++ TA PML+GTLVT  GF+P G   S AGE+T  +F ++ ++LI SW+VAV 
Sbjct: 425  IKASAYAWSHTAAPMLSGTLVTAVGFMPNGFARSTAGEYTSNMFWIVGIALIASWVVAVA 484

Query: 483  FTPLLGVTILP--KTMKSHHEK--KGRFASGFSWLLGRALRWRWVTIVATVALFALSIGG 538
            FTP LGV +LP  K ++  H+     R  + F  +LG  +  +W+     + LF +S+ G
Sbjct: 485  FTPYLGVKMLPDIKKVEGGHDAIYNTRNYNRFRQVLGHVIARKWIVAGTVITLFVVSVLG 544

Query: 539  MSLVQQQFFPSSDRVELIVDWNLPQNSSIAETNRQMAQFEQEMLAKNTDIDHWTTYVGEG 598
            M  V++QFFP+SDR E++V+  +P  +SI +T+   A+ E   LA+  +    T+Y+G+G
Sbjct: 545  MGAVKKQFFPTSDRPEVLVEVQMPYGTSIEQTSIATAKVE-AWLAQQKEASIVTSYIGQG 603

Query: 599  APRFILSFDVQTPDVTFGQTVIVTKGLDVRDKVRAELQDYLDRTFIGTDAFVKLLDI--G 656
            APRF L+   + PD +F + V++      R+ ++  L++ +    +  +A V++  I  G
Sbjct: 604  APRFFLAMSPELPDPSFAKIVVLAGNDKERETLKFRLREAI-AGGLAPEAQVRVTQIVFG 662

Query: 657  PPVGKPVQYRLSGPDIQKVRELGQQLSGIVGEHRLLSNLVMDWNEPTRVVKVDVLQDKAR 716
            PP   PV YR+ GPD  K+R +  ++  ++    ++  +  DW      +   + QD+ +
Sbjct: 663  PPSPFPVAYRVMGPDPDKLRAIADEVGTVMRASPMMRTVNTDWGPRVPTLHFTLNQDRLQ 722

Query: 717  QLGVSSEDIANAMNSIVEGSTVTQVRDDIYLVNVVARAQLAERGSIETLQNLQLPATNGK 776
             +G++S  +++ +  ++ G  +T+VR+DI  V VV RA    R     + +  L  + G+
Sbjct: 723  AVGLTSNSVSSQLQFLLSGIPLTEVREDIRSVQVVGRAAGDIRLDPARIADFTLVGSAGQ 782

Query: 777  AVPLSAIANFRYELEQPTIWRRDRIPTVTVKAAIIGPTQPATIVEQLKPKLEAFEKMLPV 836
             +PLS + +    +E P + RRDR PT+TV+  I    QP  +   +  +L+     LP 
Sbjct: 783  RIPLSQVGSVDVRMEDPILRRRDRTPTITVRGDIAEGLQPPDVSTAVMTQLQPIIDRLPS 842

Query: 837  GYKLETGGSVESSADSQAPIVAVVPLMLFAMATILMVQLQSFSRLFLVFAVAPTALIGVV 896
            GY++E  GS+E SA +   ++ + P+M+     I+++Q++S + + +VF  +P  LIGVV
Sbjct: 843  GYRIEQAGSIEESAKATEAMLPLFPIMIALTLLIIILQVRSMAAMVMVFLTSPLGLIGVV 902

Query: 897  VALLFSNAPMGFVAILGVLALIGILIRNSVILVVQIEHLRSEGVSAWRAVIEATEHRMRP 956
              LL    P G  A++G++AL GIL+RN++IL+ QI H   EG+  +RAV+EAT  R RP
Sbjct: 903  PTLLLFQQPFGINALVGLIALSGILMRNTLILIGQIHHNEQEGLDPFRAVVEATVQRARP 962

Query: 957  IMLTAAAATLALIPISREIFWGPMAYAMMGGIVVGTALTLLFLPALYVAWFRI 1009
            ++LTA AA LA IP++  +FWG +AY ++GG + GT LTL+FLPA+Y  WF+I
Sbjct: 963  VILTALAAILAFIPLTHSVFWGTLAYTLIGGTLAGTVLTLVFLPAMYSIWFKI 1015