Pairwise Alignments

Query, 229 a.a., two component response regulator from Agrobacterium fabrum C58

Subject, 222 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  135 bits (339), Expect = 8e-37
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 8/221 (3%)

Query: 6   VRILIVDDEPPIRKLLRVGLSTQGYAVSEAMNAKVAMELVREDKPDLVVLDLGLPDVSGH 65
           +R+L+V+D  P+   L  GL  QGYAV    + + A+   + +  DL++LDLGLP + G 
Sbjct: 1   MRLLLVEDNVPLADELTAGLQRQGYAVDWLADGRDAVYQGQSEPYDLIILDLGLPGLPGL 60

Query: 66  DLLEKWRSDGLALPVIILSSRTDEAGIVRALELGADDYISKPFGMNELVARIRVALRHRL 125
           D+L +WR+ GLA PV+IL++R   A  +  L+ GADDY+SKPF   EL  RI+  LR R 
Sbjct: 61  DVLAQWRAAGLATPVLILTARGSWAERIEGLKAGADDYLSKPFHPEELQLRIQALLR-RA 119

Query: 126 QTQGEKPVFQTGDLSVDLVRRIVKVEDREVKLSPKEYDILRVLVQHAGKVLTHRFLLEHV 185
           +    +P  +   L +D  R+ V  +  +V+L+  E+ +LR  + H  ++L+   L EH+
Sbjct: 120 RGLANQPKLEAAGLHLDESRQCVSRDGVDVQLTAAEFRLLRYFMLHPQQILSKSHLAEHL 179

Query: 186 WDELT--DVQYLRVYVRQLRQKIEKLPDQPRYILTETGVGY 224
           +D  T  D   L V+V  LR+K+ +       I T  G GY
Sbjct: 180 YDGETERDSNVLEVHVNHLRRKLGR-----SVIETRRGQGY 215