Pairwise Alignments

Query, 370 a.a., enhanced entry protein from Agrobacterium fabrum C58

Subject, 250 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 64/217 (29%), Positives = 93/217 (42%), Gaps = 9/217 (4%)

Query: 109 VQALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAMFKFAL 168
           V+A    L  A+ G   AQ L+ +++  G GIARDE  A  W++ AA+ G  +A      
Sbjct: 25  VRAAQAILIAAKEGVVDAQALLGQILLEGRGIARDEALALRWFRIAAQSGHLMARNMAGR 84

Query: 169 ILMEGKFVTRDKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKSAE 228
               G     D+  A    R AA+AG    Q+N+  +L +    A+    AL FY ++AE
Sbjct: 85  CQEHGWGCAVDEVAAAREYRMAAKAGLDWGQYNYANLLATGRGVAEDQQQALAFYRQAAE 144

Query: 229 QGIADAQYAVSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGERN 288
           QG A +   V +        P +  A A DW  R+A+AG    Q      L +       
Sbjct: 145 QGHAKSMNLVGRYLEEGLFCPRDLDA-AVDWYRRSAEAGDFRGQFSYAAVLAD----SGQ 199

Query: 289 LDEGFRWLYGAAQRGNVVAQNKVAHLYVQALGTRPDP 325
           ++    WL  A   GN+    K      +AL    DP
Sbjct: 200 IEAALAWLRKALAGGNL----KFLRTAHKALAAANDP 232



 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 1/150 (0%)

Query: 190 AAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAVSQIYWSVKDVP 249
           AA+ G   AQ   GQIL+     A+   +AL ++  +A+ G   A+    +         
Sbjct: 34  AAKEGVVDAQALLGQILLEGRGIARDEALALRWFRIAAQSGHLMARNMAGRCQEHGWGCA 93

Query: 250 TEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLYGAAQRGNVVAQN 309
            ++ A AR++ M AAKAG D  Q +    L  G G   +  +   +   AA++G+  + N
Sbjct: 94  VDEVAAAREYRM-AAKAGLDWGQYNYANLLATGRGVAEDQQQALAFYRQAAEQGHAKSMN 152

Query: 310 KVAHLYVQALGTRPDPVEAAKWYVLSRRAG 339
            V     + L    D   A  WY  S  AG
Sbjct: 153 LVGRYLEEGLFCPRDLDAAVDWYRRSAEAG 182



 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 4/103 (3%)

Query: 238 VSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLY 297
           V Q+   + D P     +A   ++ AAK G   AQ  LG  L+ G G  R+     RW  
Sbjct: 13  VEQLQSMLDDSPV----RAAQAILIAAKEGVVDAQALLGQILLEGRGIARDEALALRWFR 68

Query: 298 GAAQRGNVVAQNKVAHLYVQALGTRPDPVEAAKWYVLSRRAGL 340
            AAQ G+++A+N          G   D V AA+ Y ++ +AGL
Sbjct: 69  IAAQSGHLMARNMAGRCQEHGWGCAVDEVAAAREYRMAAKAGL 111