Pairwise Alignments
Query, 370 a.a., enhanced entry protein from Agrobacterium fabrum C58
Subject, 887 a.a., hypothetical protein from Hydrogenophaga sp. GW460-11-11-14-LB1
Score = 130 bits (326), Expect = 2e-34
Identities = 81/242 (33%), Positives = 119/242 (49%), Gaps = 3/242 (1%)
Query: 110 QALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAMFKFALI 169
QAL+ A A G+ SAQ L+ + G G+ +D A W+++A EGG+P+ + +
Sbjct: 287 QALEWARKAADAGEGSAQALIGTLYLEGSGVDKDLGQAVSWFRKAVEGGNPMGQWALGRL 346
Query: 170 LMEGKFVTRDKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQ 229
G V +D+ +A R AA+ G A AQ G L AK A+ +Y ++AEQ
Sbjct: 347 YATGVGVAKDETEAARLFREAADQGLAEAQAELGTALADGRGVAKDEAEAVRWYRRAAEQ 406
Query: 230 GIADAQYAVSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGERNL 289
G +AQ + YW V + A+A W ++A G T + +LGV G G R+
Sbjct: 407 GHVEAQNDLGYRYWEGLGVERD-VAQAVHWFRKSAATGDATGKFNLGVPYERGEGVPRDY 465
Query: 290 DEGFRWLYGAAQRGNVVAQNKVAHLYVQALGTRPDPVEAAKWYVLSRRAGLKDPR--LED 347
E RW AA++G A N + HLY LG + D V+A +WY + GL + L D
Sbjct: 466 GEALRWYREAAEQGERRAMNNLGHLYEAGLGVKVDHVQAVRWYRQAAERGLATAQNNLAD 525
Query: 348 FY 349
Y
Sbjct: 526 MY 527
Score = 103 bits (258), Expect = 1e-26
Identities = 74/233 (31%), Positives = 114/233 (48%), Gaps = 1/233 (0%)
Query: 107 EYVQALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAMFKF 166
++VQA+ A+ G A+AQ +A+M +RG G+++D+ A W ++AAE G A +
Sbjct: 500 DHVQAVRWYRQAAERGLATAQNNLADMYARGRGVSKDDAEAVRWRRKAAEQGHAEAQDEL 559
Query: 167 ALILMEGKFVTRDKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKS 226
EGK V +D A + R+AAE G A Q N G+ + + A +Y K+
Sbjct: 560 GHAYSEGKGVQQDDTMAVTWFRKAAEQGYARGQNNLGRAYHNGQGVERDYAQAAHWYRKA 619
Query: 227 AEQGIADAQYAVSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGE 286
EQ A A + +Y V T+ +A L +AA G+ +A +LG +NG G
Sbjct: 620 VEQNHAVATGNLGTLYRYGTGV-TKDPERASQLLRQAADGGHVSAMANLGTMYLNGEGIP 678
Query: 287 RNLDEGFRWLYGAAQRGNVVAQNKVAHLYVQALGTRPDPVEAAKWYVLSRRAG 339
RN E R+ AA RG+ Q + +++ G D EAA+ Y L+ G
Sbjct: 679 RNEQEALRFFRLAADRGSAQGQWGLGYMFSMGWGVAKDQKEAARLYRLAGAQG 731
Score = 97.4 bits (241), Expect = 1e-24
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 4/235 (1%)
Query: 122 GDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVTRDKA 181
G AQ L M+ G G+ +D W +QAA+ A A M G V +D
Sbjct: 227 GLPEAQFLKGWMLLLGEGVPQDVNVGVRWIRQAAQQQVAAAQSVLASAYMLGLGVRQDAR 286
Query: 182 KADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAVSQI 241
+A ++ R+AA+AG SAQ G + + + K L A+ ++ K+ E G Q+A+ ++
Sbjct: 287 QALEWARKAADAGEGSAQALIGTLYLEGSGVDKDLGQAVSWFRKAVEGGNPMGQWALGRL 346
Query: 242 YWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLYGAAQ 301
Y + V ++ AR AA G AQ +LG L +G G ++ E RW AA+
Sbjct: 347 YATGVGVAKDETEAAR-LFREAADQGLAEAQAELGTALADGRGVAKDEAEAVRWYRRAAE 405
Query: 302 RGNVVAQNKVAHLYVQALGTRPDPVEAAKWYVLSRRAGLKDPRLEDFYLGITDEQ 356
+G+V AQN + + Y + LG D +A W+ R++ F LG+ E+
Sbjct: 406 QGHVEAQNDLGYRYWEGLGVERDVAQAVHWF---RKSAATGDATGKFNLGVPYER 457
Score = 94.7 bits (234), Expect = 9e-24
Identities = 70/224 (31%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 107 EYVQALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAMFKF 166
+ QA+ A GDA+ + + RG G+ RD A WY++AAE G+ AM
Sbjct: 428 DVAQAVHWFRKSAATGDATGKFNLGVPYERGEGVPRDYGEALRWYREAAEQGERRAMNNL 487
Query: 167 ALILMEGKFVTRDKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKS 226
+ G V D +A + R+AAE G A+AQ N + +K A+ + K+
Sbjct: 488 GHLYEAGLGVKVDHVQAVRWYRQAAERGLATAQNNLADMYARGRGVSKDDAEAVRWRRKA 547
Query: 227 AEQGIADAQYAVSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGE 286
AEQG A+AQ + Y K V + A W +AA+ GY Q +LG NG G E
Sbjct: 548 AEQGHAEAQDELGHAYSEGKGV-QQDDTMAVTWFRKAAEQGYARGQNNLGRAYHNGQGVE 606
Query: 287 RNLDEGFRWLYGAAQRGNVVAQNKVAHLYVQALGTRPDPVEAAK 330
R+ + W A ++ + VA + LY G DP A++
Sbjct: 607 RDYAQAAHWYRKAVEQNHAVATGNLGTLYRYGTGVTKDPERASQ 650
Score = 81.6 bits (200), Expect = 8e-20
Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 119 AQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVTR 178
A++G +A+ + G + +D + AAFW +A A+ A++ ++G + +
Sbjct: 152 AESGVVNAEFNLGSRYMHGEDVPQDGQKAAFWLGRAHAQQHVWALVMLAVLHLDGTLMPK 211
Query: 179 DKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAV 238
+ A A +++ + G AQF G +L+ + + + + + ++A+Q +A AQ +
Sbjct: 212 NGALALKLVQQGMDRGLPEAQFLKGWMLLLGEGVPQDVNVGVRWIRQAAQQQVAAAQSVL 271
Query: 239 SQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLYG 298
+ Y V + + +A +W +AA AG +AQ +G + G G +++L + W
Sbjct: 272 ASAYMLGLGVRQDAR-QALEWARKAADAGEGSAQALIGTLYLEGSGVDKDLGQAVSWFRK 330
Query: 299 AAQRGNVVAQNKVAHLYVQALGTRPDPVEAAKWYVLSRRAGLKDPRLE 346
A + GN + Q + LY +G D EAA+ + + GL + + E
Sbjct: 331 AVEGGNPMGQWALGRLYATGVGVAKDETEAARLFREAADQGLAEAQAE 378
Score = 75.5 bits (184), Expect = 5e-18
Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 40/263 (15%)
Query: 114 KALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAM---------- 163
+ L A+ GDA AQ +A G G +D + AA W +++A+ G P AM
Sbjct: 40 RQLDAAEQGDAEAQWRLAHAYQSGYGTRKDARKAAQWMRRSADQGHPSAMTDVGVELFHA 99
Query: 164 -------------------------FKFALILMEGKFVTRDKAKADDFMRRAAEAGNASA 198
+ AL L+EGK +D A + RAAE+G +A
Sbjct: 100 ADPAGWQEAARLFSAAAAKGGKSAVYNQALTLLEGKGAQKDTAAGLVLLERAAESGVVNA 159
Query: 199 QFNWG-QILVSENPGAKGLLMALPFYEKSAEQGI-ADAQYAVSQIYWSVKDVPTEKKAKA 256
+FN G + + E+ G A A+Q + A AV + ++ + A A
Sbjct: 160 EFNLGSRYMHGEDVPQDGQKAAFWLGRAHAQQHVWALVMLAVLHLDGTLM---PKNGALA 216
Query: 257 RDWLMRAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLYGAAQRGNVVAQNKVAHLYV 316
+ + G AQ G L+ G G ++++ G RW+ AAQ+ AQ+ +A Y+
Sbjct: 217 LKLVQQGMDRGLPEAQFLKGWMLLLGEGVPQDVNVGVRWIRQAAQQQVAAAQSVLASAYM 276
Query: 317 QALGTRPDPVEAAKWYVLSRRAG 339
LG R D +A +W + AG
Sbjct: 277 LGLGVRQDARQALEWARKAADAG 299
Score = 57.8 bits (138), Expect = 1e-12
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Query: 107 EYVQALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAMFKF 166
+Y QA + A A + + G G+ +D + A+ +QAA+GG AM
Sbjct: 608 DYAQAAHWYRKAVEQNHAVATGNLGTLYRYGTGVTKDPERASQLLRQAADGGHVSAMANL 667
Query: 167 ALILMEGKFVTRDKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKS 226
+ + G+ + R++ +A F R AA+ G+A Q+ G + AK A Y +
Sbjct: 668 GTMYLNGEGIPRNEQEALRFFRLAADRGSAQGQWGLGYMFSMGWGVAKDQKEAARLYRLA 727
Query: 227 AEQGIADAQYAVSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGE 286
QG A + ++ + VP + R + +A GY A +LG + G G
Sbjct: 728 GAQGQVAALNNLGYLHELGEGVPQDHTEAVRLY-RQAFDRGYLWAGANLGEMMAYGRGTP 786
Query: 287 RNLDEGFR 294
R++ E R
Sbjct: 787 RDMAEAVR 794