Pairwise Alignments
Query, 370 a.a., enhanced entry protein from Agrobacterium fabrum C58
Subject, 331 a.a., TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Score = 73.9 bits (180), Expect = 6e-18
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 2/215 (0%)
Query: 119 AQNGDASAQTLVAEMMS-RGLGIARDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVT 177
AQ+G++ AQ ++ + + + + ++K + +W QQAAE G A + L +
Sbjct: 22 AQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAEQGHCEAQYWLGLRYKDTPTDM 81
Query: 178 RDKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYA 237
+D A + +AA+ G+ A G + E A A+ +Y K AEQ AQY
Sbjct: 82 KDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYN 141
Query: 238 VSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLY 297
+ ++Y S V + +A W +AA G+ +Q L NG G +NL W
Sbjct: 142 LGRMYHSGTGV-EQNDTQALYWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYK 200
Query: 298 GAAQRGNVVAQNKVAHLYVQALGTRPDPVEAAKWY 332
+A + + +Q ++ + Y G + D +A W+
Sbjct: 201 KSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWF 235
Score = 72.0 bits (175), Expect = 2e-17
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
Query: 119 AQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVTR 178
AQ G A + + G+A D A WY++ AE +A + + G V +
Sbjct: 95 AQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQ 154
Query: 179 DKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAV 238
+ +A + ++AA G+ ++Q + + K L +A +Y+KSA Q + +QY +
Sbjct: 155 NDTQALYWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQM 214
Query: 239 SQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLYG 298
Y+ K + + + +A W +AA G D A +G G G E+N W +
Sbjct: 215 GYCYYIGKGIKQDYQ-QAIYWFRKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHK 273
Query: 299 AAQRGNVVAQNKVAHLYVQALGTRPDPVEAAKWYVLSRRAG 339
+A+ N + +Y GT D +A W+ ++ G
Sbjct: 274 SAECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKAQPTG 314
Score = 62.8 bits (151), Expect = 1e-14
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 12/170 (7%)
Query: 186 FMRRAAEAGNASAQFNWGQILVSENP-GAKGLLMALPFYEKSAEQGIADAQYAVSQIYWS 244
++++AAE G+ AQ+ W + + P K +AL + EK+A+QG ++A + + W
Sbjct: 54 WLQQAAEQGHCEAQY-WLGLRYKDTPTDMKDNTLALFWSEKAAQQG---HRHAFNTLGW- 108
Query: 245 VKDVPTEKK---AKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLYGAAQ 301
V++ T A+A W + A+ ++ AQ +LG +G G E+N + W AA
Sbjct: 109 VQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAAL 168
Query: 302 RGNVVAQNKVAHLYVQALGTRPDPVEAAKWYVLSRRAGLKDPRLEDFYLG 351
+G+ +Q ++A++Y G R + AA WY +++ L++ + +G
Sbjct: 169 QGHCASQERLAYMYGNGKGCRKNLSLAALWY---KKSALQESSYSQYQMG 215
Score = 58.9 bits (141), Expect = 2e-13
Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Query: 107 EYVQALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAMFKF 166
+Y QA+ A+ AQ + M G G+ +++ A +W++QAA G + +
Sbjct: 119 DYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERL 178
Query: 167 ALILMEGKFVTRDKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKS 226
A + GK ++ + A + +++A ++ +Q+ G + A+ ++ K+
Sbjct: 179 AYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKA 238
Query: 227 AEQGIADAQYAVSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNGFGGE 286
A+QG DA ++ +Y V + + A +W ++A+ + +LG +G G
Sbjct: 239 ADQGDDDAYNSIGWMYKCGHGV-EQNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTA 297
Query: 287 RNLDEGFRWLYGAAQRGNVVAQNKVAHLYVQ 317
++L + W A G ++ L Q
Sbjct: 298 QDLQQALYWFKKAQPTGKWNVDEEIRKLEAQ 328
Score = 25.4 bits (54), Expect = 0.002
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 101 GHFQRGEYVQALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGG 158
GH Y AL+ A+ ++S + M G G A+D + A +W+++A G
Sbjct: 257 GHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKAQPTG 314