Pairwise Alignments

Query, 177 a.a., omp16 protein from Agrobacterium fabrum C58

Subject, 220 a.a., porin from Agrobacterium fabrum C58

 Score = 72.4 bits (176), Expect = 5e-18
 Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 3/158 (1%)

Query: 17  RNPAVIAMTLALALAGCANKKNMPNSAGELG--LGGAGSATPGSQQDFTVNVGDRIFFDT 74
           RN A+I   +  ALAG A    M     EL   L G G +         +N+   I F T
Sbjct: 59  RNAALIGAGIG-ALAGGAIGNYMDGQEAELRAQLQGTGVSVTRRGDSIVLNMPSNITFAT 117

Query: 75  DSTSIRADAQQTLQRQAQWLSRYPNYAITVEGHADERGTREYNLALGARRAAATRDFLAS 134
           D   +     QTL   A  L+++    I + GH D  G+ ++N AL  RRAA+  ++L +
Sbjct: 118 DQDQVIPPFYQTLDSVAIVLNKFNRTLIDINGHTDSTGSLQHNQALSERRAASVANYLGA 177

Query: 135 QGVPASRMKTISYGKEKPVAVCDDISCWSQNRRAVTVL 172
           +GV   R+ T+ +G  +P+A        +QNRR   ++
Sbjct: 178 RGVDQRRISTLGFGPSQPIASNATSDGRAQNRRVEVLI 215