Pairwise Alignments

Query, 380 a.a., tRNA-specific 2-thiouridylase MnmA from Agrobacterium fabrum C58

Subject, 374 a.a., tRNA-specific 2-thiouridylase MnmA from Pseudomonas putida KT2440

 Score =  208 bits (530), Expect = 2e-58
 Identities = 131/370 (35%), Positives = 195/370 (52%), Gaps = 28/370 (7%)

Query: 1   MSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCETLGIP 60
           MSGGVDSSV A +L  +GY V G+ ++ ++          C A +D+ DA+ VC+ +GI 
Sbjct: 18  MSGGVDSSVSALLLIEQGYQVEGLFMKNWEEDDGTEY---CTAREDLADAQAVCDRIGIK 74

Query: 61  HYVLDYEARFRETVINPFAEAYAMGETPIPCVACNQTVKFADLLATAQELGADALATGHY 120
            +  ++ A + + V   F E Y  G TP P + CN+ +KF   L  A  LGAD +ATGHY
Sbjct: 75  LHTANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNREIKFKAFLDYALSLGADLIATGHY 134

Query: 121 IRSRPNPVSGQPGRRALYRPIDSDRDQSWFLFATTQEQIDYLRFPLGGLSKAETRALAEE 180
           +R R      +     L + +D ++DQS+FL A   ++I    FP+G L K E RA+AE+
Sbjct: 135 VRRRDTGALTE-----LLKGLDPNKDQSYFLHAVGGQEIARTLFPVGELEKPEVRAIAEK 189

Query: 181 MGLVVAKKADSQDICFVPQGKYTDIINKLKPNAALAGDIVHLDGRVLGRHDGIVHYTIGQ 240
            GL  AKK DS  ICF+ + +++D + +  P  A  GDI   +G V+GRH G++++TIGQ
Sbjct: 190 HGLATAKKKDSTGICFIGERRFSDFLKQYLP--AQPGDIETTEGEVIGRHHGLMYHTIGQ 247

Query: 241 RRGIGV-----ATGEPLYVVHLDARGRRVIVGPREA---LETRRVYLRDMNWLGDGALAA 292
           R+G+G+     A+ EP YV+H D     ++VG       L +R +   ++ W+       
Sbjct: 248 RQGLGIGGLKDASDEPWYVLHKDLARNVLVVGQGNEHPWLFSRALLASEIFWVN----PV 303

Query: 293 DAGQGFTCFAKVRSTRPPTEAVLHADENGIYVDLMTGEAGVAPGQACVLYSAPGPDARV- 351
           D G      AKVR  +      L    +G        +  V PGQ+ V Y     D  V 
Sbjct: 304 DLGSPRQLTAKVRYRQSDQRCTLERTASGYRAVFDEPQRAVTPGQSVVFY-----DGEVC 358

Query: 352 YGGGFIDRSE 361
            GGG I+ +E
Sbjct: 359 LGGGVIEAAE 368