Pairwise Alignments

Query, 681 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  155 bits (392), Expect = 7e-42
 Identities = 152/555 (27%), Positives = 235/555 (42%), Gaps = 65/555 (11%)

Query: 61  EVDPQFLRMLVAYEDQRFYDHHGVDPWALLRSAWQLASNGRIVSGASTLSMQVARLIEPR 120
           +V P  L  LVA ED+ FY H GV P ++ R+ W   S G++  G STL+ Q+ +     
Sbjct: 175 QVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKNFYLT 234

Query: 121 ADRSFSAKFLQAARALQIERRLDKAEILDLYLNIAPYGGN----LEGVRAASLAWFGKEP 176
            +RS + K  +A  A+ +E    K EIL+ YLN    G +    + G   AS  +FG+  
Sbjct: 235 NERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPL 294

Query: 177 GRLDTAEAALMVALPQLPEKRRPDRFPEAAKQARERVLQRLAVERVVGEGEAERAALAAV 236
             L   + AL+V + + P    P R PE A + R  VL  L  + V    +   A    +
Sbjct: 295 SELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAKKMPL 354

Query: 237 PVNRR------DLPSYAPHMAVAARAKFQNAGEVRSTLRL-----PI-QRELEGVARHAA 284
            V  R        P +   +    R  +++       LR+     PI Q + E       
Sbjct: 355 GVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTF 414

Query: 285 EKL-----GDKVSVAIVMADAQTGDILAEVGSADYLDTARRGFVEMSRAVRSPGSTLKPF 339
           ++L      D+V  A+V+ + +TG++ A +GS      +  GF     AVR  GS +KP 
Sbjct: 415 KRLTGRKGSDEVEAAMVVTNPETGEVQAMIGSR---QASFAGFNRALDAVRPIGSLVKPA 471

Query: 340 IYGLAFE-DGLVGQETIIEDRPADFSG-----YRPRNFDMHYQGDVSIRQALQLSLNVPA 393
           +Y  A E        + + D P    G     + P+NFD    G V + Q +  S N+  
Sbjct: 472 VYLTALEKPSKYTLTSWLSDDPLSVKGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNIST 531

Query: 394 VKLLDAVSPSALMVRFRRAGVKLVLPANEAPGLAIALGGAGISLVDLVQLYAGLAGSG-- 451
            +L   V    ++    R GV    PA      +I LG   ++ +++  +Y  LA  G  
Sbjct: 532 SRLGLEVGVPNVLKTIARLGVTREFPAFP----SILLGAGAMTPMEVATMYQTLANGGFN 587

Query: 452 DPMRLGDGVRTVPERLEGDRL----------FSHAAIWNVTDILSGVLP----------- 490
            PMR   G+R+V    EG+ L          F   +I+ + + +  V+            
Sbjct: 588 TPMR---GIRSV-LTAEGEPLKRYPFQIQQRFDAGSIYLIQNAMQRVMREGTGRSVYSVL 643

Query: 491 PLGMKQRGIAYKTGTSYGYRDAWSVGYDGRHVIGIWVGRADNGAVPGIAGYATAAPILFE 550
           P  +    +A KTGTS   RD+W  G+    +  +W+GR DNG  P   G   A  +   
Sbjct: 644 PANLT---LAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRDDNGKTP-FTGATGALQVWTS 699

Query: 551 AFAKSGVAVTPMPGP 565
              K+      MP P
Sbjct: 700 FMRKADPLPLNMPQP 714