Pairwise Alignments

Query, 323 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  108 bits (270), Expect = 2e-28
 Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 19/292 (6%)

Query: 28  NRDPDQP-ETELAEFRRWMELDPENCRAYTAA-----KRILGEARTAIRSDAGLR---EA 78
           NR  +QP + E A F+RW+  DP +  AY  A     K     AR A      L+   +A
Sbjct: 20  NRINEQPGQAEGAAFKRWLLADPAHRAAYDQAQVLWQKSAAPAARLADEEQDALQRYLDA 79

Query: 79  PVSSSSRGRNAIISSVVAIAAAGTLFIALDG---PMRMSADIMSD---TDEMPEVTLEDG 132
                +RG    ++ + A+AA   L + + G   P     D+ +D   T ++ +V L D 
Sbjct: 80  MARPPARGGWRRVAGL-ALAACLVLAVGVAGGWHPGYWLQDLQADYSSTGQIRQVILADQ 138

Query: 133 SRVQLNASSAIALDFTSERRTVRLLRGQAFFQVSPDAKRPFSVSADDTLVTALGTAFDVR 192
           S+V L+A SAIA+DF    R VRLL G AFF+V+   + PF V A    V  LGT F+VR
Sbjct: 139 SQVTLDAGSAIAVDFAQGERRVRLLHGAAFFEVTHTGE-PFLVEAAGGEVRVLGTQFEVR 197

Query: 193 QSATDTRIAVTEHSVRVDFKEPGALPVKVGEGEEVLHLNETGKSTIRKTDANTALAWRRG 252
           +     ++ V    V V     G +  ++   +++ +       T+   D++  LAWR+G
Sbjct: 198 EQGEGAQVTVRSGRVGVS-PAQGTVARELTANQQLTYRAGRVGDTL-AVDSDNRLAWRQG 255

Query: 253 QLTVDNMPLSYVIEEIQRHFHGRIVIGNEATARRVVSGTLFVTDTESALNFL 304
            L    +PL+ VI+++ R++ GRI++ +    +R VSG+  V +   AL+ L
Sbjct: 256 WLNYYQVPLAQVIDDLGRYYPGRILLLDGDLGQRKVSGSFPVAEPLLALDSL 307