Pairwise Alignments

Query, 323 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 316 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 81/298 (27%), Positives = 136/298 (45%), Gaps = 14/298 (4%)

Query: 20  EAADWVFRNR-DPDQPETELAEFRRWMELDPENCRAYTAAKRILGEARTAIRSDAGLREA 78
           +A DW+ + R D   P TE  +F+ W+   P N  A+      LG+    +  D   R  
Sbjct: 13  QAIDWLVKLRFDTPSPRTE-QQFQHWLASHPHNRLAWQRVSN-LGDELAGLPKDLSRRTL 70

Query: 79  PVSSSSRG-RNAIISSVVAIAAAGTLFIALDGPM---RMSADIMSDTDEMPEVTLEDGSR 134
             S   +  R   +  +  +A  G+L  A   P+   ++ AD  + T E  +    DGSR
Sbjct: 71  DASQHPKASRRDHLKLLGLLAVGGSLGWAAREPLGLPQLLADTSTATGERRQWQGSDGSR 130

Query: 135 VQLNASSAIALDFTSERRTVRLLRGQAFFQVSPDAKRPFSVSADDTLVTALGTAFDVRQS 194
           +QLN +SAI L +++E+R ++L+ G+   + +P+  RPF V+     +T       +R++
Sbjct: 131 LQLNTASAIDLHYSAEQRQLKLIHGEVSLESNPNDNRPFHVATRVGPLTTFDGQLLLREN 190

Query: 195 ATDTRIAVTEHSVRVDFKEPGALPVKVGEGEEVLHLNETGKSTIR-KTDANTALAWRRGQ 253
           +    ++V    V +      A  V  GE  +V     T   +I+ +T  N    W  G 
Sbjct: 191 SQGLLLSVRRGEVTLFPASASARQVLPGETLQV-----TADGSIQARTLHNDPWGWTEGV 245

Query: 254 LTVDNMPLSYVIEEIQRHFHGRIVIGNEATARRVVSGTLFVTDTESALNFLRTALNIQ 311
           L+V  MPL+    E+ R+  G +    E    + VSGT  + DT   L  L  +L ++
Sbjct: 246 LSVQQMPLAEFASELGRYRPGLLRCAPEVAGLK-VSGTYQLADTGQILQLLTRSLPVR 302