Pairwise Alignments

Query, 180 a.a., sigma factor from Agrobacterium fabrum C58

Subject, 178 a.a., no description from Variovorax sp. SCN45

 Score = 63.5 bits (153), Expect = 2e-15
 Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 6/162 (3%)

Query: 17  LNRAIVEHYGDIIKAVGGRSRSDGAAREIVHDLYVKLALQPDALSGKRSIKAFLCRAASN 76
           L+  +  HY  +++ +         A + +HD +++LA   D+     +  A++ RAA N
Sbjct: 9   LSAFVTSHYVQLVRRLTRHLGCPDLASDALHDAWLRLA-DIDSFHLVGNPDAYVYRAACN 67

Query: 77  MRIDRIRREQLESRLFSGSDEDARAVFAADNAPDQGLAVEARLTVLK--QAIADLPEKRR 134
             +DR+R  +L         E AR    AD+AP      EAR  V+   +A+  LP + R
Sbjct: 68  AALDRLRSARLRQHAHEADAELARV---ADHAPGPHHIAEARSDVMAVDRAMRHLPHRHR 124

Query: 135 TAFVLHRLHHLSPDQIASKLKISRNMVDRHLRRALSHCLDRL 176
           +  V  R+H +S  ++A +  +S   VD  L +AL++C   L
Sbjct: 125 SILVGLRVHEMSRQEVAIRQGLSLRRVDTVLDQALAYCAGHL 166