Pairwise Alignments

Query, 180 a.a., sigma factor from Agrobacterium fabrum C58

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 67.8 bits (164), Expect = 1e-16
 Identities = 37/131 (28%), Positives = 72/131 (54%), Gaps = 4/131 (3%)

Query: 42  AREIVHDLYVKLALQPDALSGKRSIKAFLCRAASNMRIDRIRREQLESRLFSGSDEDARA 101
           A ++V +L+++   +P+      ++  +L R A N+ ID +R E    R+   +   + A
Sbjct: 46  ASDLVQELFLRFWRRPEVKV--EALDTYLLRCAGNLAIDHLRSESSRERVAEAAVPVSEA 103

Query: 102 VFAADNAPDQGLAVEARLTVLKQAIADLPEKRRTAFVLHRLHHLSPDQIASKLKISRNMV 161
             A   AP+Q + V+  L  ++  +  LPE+ R  F+L+R+H     +IA  +++S++ V
Sbjct: 104 SLA--QAPEQAVEVDHDLQRIEATLRALPERTRQIFLLNRIHGCKYSEIAKAMQLSQSAV 161

Query: 162 DRHLRRALSHC 172
           ++H+ RAL  C
Sbjct: 162 EKHMMRALEAC 172