Pairwise Alignments

Query, 331 a.a., site-specific tyrosine recombinase XerD from Agrobacterium fabrum C58

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

 Score =  223 bits (569), Expect = 4e-63
 Identities = 137/320 (42%), Positives = 185/320 (57%), Gaps = 22/320 (6%)

Query: 6   MAGRDGARLESFLEMMSAERGAAANTLSSYEHDLADLREFLGRRGQSLTEAQTPDLSAYL 65
           M  +D A +E FL+ +  ER  A NTLSSY +DL  L ++L     SL +AQ  DL  +L
Sbjct: 1   MQKQDQALIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFL 60

Query: 66  THLAAQGFAATSQARRLSSMRQFYRFLYSEGLRGDDPTGIIDAPRKGLALPKTMSVADVN 125
                 G+ ATS AR LS+MR+ +++LY E  R DDP+  + +P+    LPK ++ A V+
Sbjct: 61  AERLEGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVD 120

Query: 126 RLLGLAAQEAATEGPGQLARIRMHLLLELLYATGMRVSELVSLPVKVLRQEGRFLMIRGK 185
            LL     +   E       +R   +LELLYATG+RVSELV L +  +      + + GK
Sbjct: 121 ALLAAPVTDQPIE-------LRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGK 173

Query: 186 GNKDRMVLLSRAAIEAMEKY-EAGRKALSQEKSKAAASQKKTDTAESPWLFPSNSKEGHL 244
           GNK+R+V L   A+  +E+Y E  R  L   ++                LFPSN  +  +
Sbjct: 174 GNKERLVPLGEEAVYWLEQYLEYSRPWLLNGQTLDV-------------LFPSNRAQ-QM 219

Query: 245 PRQVFARDLKDIAIRAGLTASAVSPHVLRHAFASHLLQNGADLRAVQELLGHSDISTTQI 304
            RQ F   +K  A  A + ++ +SPHVLRHAFA+HLL +GADLR VQ LLGHSD+STTQI
Sbjct: 220 TRQTFWHRIKHYATLASIDSNKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQI 279

Query: 305 YTHVLEERLQELVQTHHPLA 324
           YTHV  ERL+ L Q HHP A
Sbjct: 280 YTHVATERLRLLHQQHHPRA 299