Pairwise Alignments

Query, 331 a.a., site-specific tyrosine recombinase XerD from Agrobacterium fabrum C58

Subject, 306 a.a., Tyrosine recombinase XerD from Acinetobacter radioresistens SK82

 Score =  183 bits (465), Expect = 4e-51
 Identities = 120/311 (38%), Positives = 178/311 (57%), Gaps = 25/311 (8%)

Query: 14  LESFLEMMSAERGAAANTLSSYEHDLADLREFLGRRGQSLTEAQTPDLSAYLTHLAAQGF 73
           L+ F + + A+   + +T ++Y  DL    E+       L  ++  D++  L  L  QG 
Sbjct: 21  LQGFRDFLIAQT-VSPHTRNAYLSDLIQCSEYCPSTPLPLWNSE--DIADVLFELTKQGK 77

Query: 74  AATSQARRLSSMRQFYRFLYSEGLRGDDPTGIIDAPRKGLALPKTMSVADVNRLLGLAAQ 133
           +  S AR LS++R F++F+  + LR D+P      P+ G ALPK +S  DV  LL     
Sbjct: 78  SPRSIARTLSALRSFFKFMREQQLRSDNPVATHKTPKLGRALPKDLSELDVEHLLHAPDI 137

Query: 134 EAATEGPGQLARIRMHLLLELLYATGMRVSELVSLPVKVLRQEGRFLMIRGKGNKDRMVL 193
             A         +R   +LE+LYA G+RV+EL++L ++++  +  +L I GKGNK+R+V 
Sbjct: 138 NTALG-------LRDRAMLEVLYACGLRVTELLNLRLELINLKQGYLRITGKGNKERLVP 190

Query: 194 LSRAAIEAMEKYEAGRKALSQEKSKAAASQKKTDTAESPWLFPSNSKEGHLPRQVFARDL 253
           L + AIE +EKY          +++    +  TD     +LF +    G + RQ F   +
Sbjct: 191 LGQVAIEWVEKY--------LNEARPQLYKSATD-----YLFLTQHG-GIMSRQNFWYAI 236

Query: 254 KDIAIRAGLTASAVSPHVLRHAFASHLLQNGADLRAVQELLGHSDISTTQIYTHVLEERL 313
           K  A++AG+ A  +SPH LRHAFA+HLL +GADLR VQ LLGHSD+STTQIYTHV + R+
Sbjct: 237 KRYALQAGIQAE-LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQIRM 295

Query: 314 QELVQTHHPLA 324
           Q+L   HHP A
Sbjct: 296 QQLHAAHHPRA 306