Pairwise Alignments

Query, 414 a.a., transcriptional regulator from Agrobacterium fabrum C58

Subject, 406 a.a., DNA-binding transcriptional regulator NagC from Escherichia coli ECRC98

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 74/345 (21%), Positives = 141/345 (40%), Gaps = 9/345 (2%)

Query: 2   PQPMSAIASTELVRQKNSLSVMAALRLYGSLSHTDMSSFTGLASATVSVITTDLERTGLI 61
           P   + I + +LV+Q NS +V   +  YG +S   ++  + LA A+V+ IT  L   GLI
Sbjct: 3   PGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVTKITRQLIERGLI 62

Query: 62  LRKEQIAAAGRGRPRILFAPNGAFCHVAIIIISSDSVQYSLVDYAGKLVDRFTEQRITAE 121
              +Q A+ G GR  I         H   + +       +L D + K++           
Sbjct: 63  KEVDQQASTG-GRRAISIVTETRNFHAIGVRLGRHDATITLFDLSSKVLAEEHYPLPERT 121

Query: 122 KGSFGGSILSGLARLADRSRIDRHDILQVSISSKGLVDAAAAVLVWSPVLGTEKIDFQQL 181
           + +   ++L+ +A+  D  +    +++ +S+   GLVD  +  + + P +  E     + 
Sbjct: 122 QQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVEA 181

Query: 182 ISQGGRIRVTLNNETLLAAKAIWMREQAKDGPKPEALVTLSLGHSIGLGIARSGAGTI-- 239
           + +  ++   + ++    A A      ++D    E  + + +    G GI  +G   I  
Sbjct: 182 LEERFKVTCFVGHDIRSLALAEHYFGASQD---CEDSILVRVHRGTGAGIISNGRIFIGR 238

Query: 240 EVSAPNFGHMLHLADGALCRCGTRGCIEAYSGFYAILRSAFEAPPQAEPAKFVPVAE--V 297
             +    GH+     G  C CG  GC+E  +   AI +       Q   ++ VP+ +  +
Sbjct: 239 NGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSR-VPLDDCTI 297

Query: 298 DKIAASARAGARMARFAFRTAGLALGNGLSRLFSLHGHMPVFITG 342
             I  +A  G  +A       G  LG  ++   +L     + I G
Sbjct: 298 KTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAG 342