Pairwise Alignments

Query, 414 a.a., transcriptional regulator from Agrobacterium fabrum C58

Subject, 399 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

 Score = 74.3 bits (181), Expect = 6e-18
 Identities = 99/409 (24%), Positives = 170/409 (41%), Gaps = 53/409 (12%)

Query: 9   ASTELVRQKNSLSVMAALRLYGSLSHTDMSSFTGLASATVSVITTDLERTGLILRKE--Q 66
           A  EL+R  N LSV+ ++R +G +S  ++S  T L++ TVS IT  L   GLIL +    
Sbjct: 4   ADPELMRAINRLSVLDSIRRHGPISRVEISERTQLSTTTVSAITASLLDDGLILTRHIGD 63

Query: 67  IAAAG-RGRPRILFAPNGAFCHVAIIIISSDSVQYSLVDYAGKLVD------RFTEQRIT 119
           I   G RGRPR++   N     V    I+++ + + + D+ G ++       R   Q I 
Sbjct: 64  IRTEGARGRPRVMLELNPDAARVVGAKIAANRMVFVVTDFCGNVLSTLALPIRVDRQPI- 122

Query: 120 AEKGSFGGSILSGLARLADRSRIDRHDILQVSISSKGLVDAAAAVLVWSPVLGTEKIDFQ 179
              G     +  G+ R    + +   D+  V +   G+++     +  SP+L    ++F 
Sbjct: 123 ---GVIADLVEDGVRRCVVDAGLSLEDVDMVCLGLPGVIEHRTGRIRSSPILREVNVNFA 179

Query: 180 QLISQGGRIRVTLNNETLLA--AKAIWMRE----QAKDGPKPEALVTLSLGHSIGLGIAR 233
           +       +   LN+ T++   A AI +       A+D    E +V +SL  ++GLG+  
Sbjct: 180 E------EMTARLNSPTIIESDAHAITLAHHWFGHARD---LEDMVLISLEQTLGLGVLH 230

Query: 234 S-----GAGTIEVSAPNFGHM-LHLADGALCRCGTRGCIEAYSGFYAILRSAFEA----P 283
                 GAG +   + N G + + LA+    R  ++    A  G   +     EA     
Sbjct: 231 QNQLFRGAGGL---SHNLGDLVIGLANEGTVRLASQAGENAILGSRPVDGRFAEAIRLGR 287

Query: 284 PQAEPAKFVPVAEVDKIAASARAGARMARFAFRTAGLALGNGLSRLFSLHGHMPVFITGP 343
                   +   + D IAA+ RAGA            ALG  L+ + +L     V ITG 
Sbjct: 288 GMQHAHALIAAEDHDLIAAALRAGA------------ALGLTLANIVTLFAPPRVIITGS 335

Query: 344 GTRYFDLLESGLRDGLAQSQAVRFGGMPKITIAANEPELVFEGHMEHAL 392
                +   + +R+    +      G+ ++       +L  +G    AL
Sbjct: 336 SLELGEPFITSIRNSYNAAVPPSLAGVAELVFDIASDDLWAQGAAAVAL 384