Pairwise Alignments

Query, 346 a.a., xylose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 356 a.a., L-arabinose ABC transporter, substrate-binding protein AraF from Variovorax sp. SCN45

 Score =  138 bits (347), Expect = 2e-37
 Identities = 111/352 (31%), Positives = 172/352 (48%), Gaps = 26/352 (7%)

Query: 2   NSFAKLLAGTAVLVSLHTAAIAADL--VVGVSWSNFQEERWKTDEAAIKAALDKAGAKYI 59
           N     LAG A+ V   T  + A    ++ +S       RW  D A ++      G K  
Sbjct: 4   NFLKATLAGVALAVVGFTPLVHAQDKGLIAISMPTKSSARWIADGANMQKYFKDKGYKTD 63

Query: 60  SADAQSSAAKQLTDVESLISQGANALIILAQDSDAIGPAVEKAVAEGIPVVGYDRLIE-N 118
              A      QL  +E+++++G+  L+I A D   +   ++KA  +G+ V+ YDRLI+ +
Sbjct: 64  LQYADDDIPNQLAQIENMVTKGSKVLVIAAIDGTTLSDVLQKAADKGVKVIAYDRLIKGS 123

Query: 119 KNA-FYITFDNKEVGRLQAAEVFKV------KPEGNYVFIKGSSSDPNADFLFAGQQEVL 171
           KN  +Y TFDN +VG LQA  +         K   N     GS  D NA F + G   VL
Sbjct: 124 KNVDYYATFDNFQVGVLQAQSIEAALGLKSGKGPFNIELFGGSPDDNNAFFFYNGAMSVL 183

Query: 172 KAAMSSGKI----KNVG--EAYTDGWKPENAQKNMEQFLTK--NNNKVDAVVASNDGTAG 223
              + SGK+    K +G  +  T  W    AQ  M+  L+     ++VDAV++  DG + 
Sbjct: 184 DPYIKSGKLVVRSKQMGMDKVGTLRWDGAVAQARMDNLLSAYYTKDRVDAVLSPYDGLSI 243

Query: 224 GAIAALAAQGM-AGSVP---VSGQDADFAALNRVALGTQTVSVWKDSRELGKEAAGIALA 279
           G +++L   G  +GS P   VSGQDA+  ++  +    QT +V+KD+REL K    +  A
Sbjct: 244 GILSSLKGVGYGSGSQPMPVVSGQDAEVPSIKSILRKEQTSTVFKDTRELAKVTVSMVDA 303

Query: 280 LAGGKKMTEIKGVTAFDGGPKKVTMQSVFLKPIAITKDNLGTV-IDAGWIKK 330
           +  GK+  E+     ++ G K V   S  LKP+++   N   V ID+G+ K+
Sbjct: 304 MLSGKQ-PEVNDTKTYNNGIKVV--PSYLLKPVSVDASNWKVVLIDSGYYKE 352