Pairwise Alignments

Query, 346 a.a., xylose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 296 a.a., ribose ABC transporter substrate-binding protein RbsB from Escherichia coli ECRC62

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 10/288 (3%)

Query: 1   MNSFAKLLAGTAVLVSLHTAAIAADLVVGVSWSNFQEERWKTDEAAIKAALDKAGAKYIS 60
           M   A L++  A+  ++   A+A D +  V  S      + + +   +   DK G   + 
Sbjct: 3   MKKLATLVSAVALSATVSANAMAKDTIALVV-STLNNPFFVSLKDGAQKEADKLGYNLVV 61

Query: 61  ADAQSSAAKQLTDVESLISQGANALIILAQDSDAIGPAVEKAVAEGIPVVGYDR-LIENK 119
            D+Q++ AK+L +V+ L  +G   L+I   DSDA+G AV+ A    IPV+  DR   + +
Sbjct: 62  LDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKGE 121

Query: 120 NAFYITFDNKEVGRLQAAEVFKVKPEGNYVF-IKGSSSDPNADFLFAGQQEVLKAAMSSG 178
              +I  DN   G++    + K   EG  V  ++G +    A     G Q+    A+++ 
Sbjct: 122 VVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQ----AVAAH 177

Query: 179 KIKNVGEAYTDGWKPENAQKNMEQFLTKNNNKVDAVVASNDGTAGGAIAALAAQGMAGSV 238
           K   +     D  + +    N+ Q L   +  V AV A ND  A GA+ AL   G +  V
Sbjct: 178 KFNVLASQPADFDRTKGL--NVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKS-DV 234

Query: 239 PVSGQDADFAALNRVALGTQTVSVWKDSRELGKEAAGIALALAGGKKM 286
            V G D        V  G    ++ +   ++G +    A  +  G+K+
Sbjct: 235 MVVGFDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKV 282