Pairwise Alignments

Query, 260 a.a., xylose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 510 a.a., D-ribose transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  190 bits (483), Expect = 4e-53
 Identities = 113/260 (43%), Positives = 161/260 (61%), Gaps = 10/260 (3%)

Query: 7   PLVEMRNISISFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRD-GGEI 65
           PL+EM+ IS +F G+  ++   + ++PGE+ AL+G NGAGKSTL+KILSGAY+ D GGEI
Sbjct: 5   PLLEMQGISKTFNGLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGEI 64

Query: 66  LINGEDADIRNPRDAKKYGIETIYQTLAVADNVDAAANLYLGRELKTKWGTLDDVAMEAS 125
            I G+     +P  AK  GI  IYQ L++  N+  A N+YLGREL+  W T+D   MEA 
Sbjct: 65  RIAGQLIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGRELRRGW-TIDRKGMEAG 123

Query: 126 AREVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQV 185
             EV+ RL   F      V +LS  +RQ V IARA+   A+IL+MDEPT  L  +ET ++
Sbjct: 124 CIEVLQRLGAEFTPATR-VSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRETDRL 182

Query: 186 GDLVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGMIILG 245
             L+K+L+ QG+ I  ISH + +++ L+DRV V+++G  +G   T D    E L  +++G
Sbjct: 183 FALIKQLRSQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGEL-TRDALSAEALVKMMVG 241

Query: 246 KVPAG------AVAGPGAVV 259
           +  +G      A   PG VV
Sbjct: 242 RDLSGFYKKEHAAYNPGNVV 261



 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 65/238 (27%), Positives = 120/238 (50%), Gaps = 31/238 (13%)

Query: 24  VENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEILINGEDAD-IRNPRDAKK 82
           V + S DL  GEV+ + G  GAG++ L +++  A  R  G + + G+    +R P DA +
Sbjct: 273 VRHCSFDLHAGEVLGIAGLVGAGRTELARLIFAADPRTSGTLEVVGKAVTPLRTPADAIR 332

Query: 83  YGI---------ETIYQTLAVADNV-------DAAANLYLGRELKTKWGTLDDVAMEASA 126
            G+         + ++  ++VADN+       DA A   L R+   +    +D     S 
Sbjct: 333 AGVVYLTEDRKAQGLFLDMSVADNINVCACVPDAHAGGVLDRDHALQRS--NDAIKSLSI 390

Query: 127 REVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVG 186
           R   G++N           ALSGG +Q V +AR +     +LI+DEPT  +     +++ 
Sbjct: 391 RVASGKVNAG---------ALSGGNQQKVLLARLLEVKPHVLILDEPTRGVDIGSKSEIY 441

Query: 187 DLVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKV---VGHARTEDVTKDEVLGM 241
            ++ +L + GIGI +IS ++ ++    DRV +M+ G++   VG A  + ++++ ++ +
Sbjct: 442 RIINQLAQAGIGIVVISSELPEIIGTCDRVLIMREGQLVAEVGGASGQAISQERIIDL 499