Pairwise Alignments

Query, 260 a.a., xylose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 509 a.a., sugar ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25

 Score =  197 bits (500), Expect = 5e-55
 Identities = 114/260 (43%), Positives = 165/260 (63%), Gaps = 10/260 (3%)

Query: 7   PLVEMRNISISFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRD-GGEI 65
           PL+EM+ IS +F G+  ++N  + ++PGE+ AL+G NGAGKSTL+KILSGAY+ D GGEI
Sbjct: 5   PLLEMQGISKTFNGLRVLKNVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGEI 64

Query: 66  LINGEDADIRNPRDAKKYGIETIYQTLAVADNVDAAANLYLGRELKTKWGTLDDVAMEAS 125
            I G+     +P  AK  GI  IYQ L++  N+  A N+YLGREL+  W T+D   MEA 
Sbjct: 65  RIGGQTIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGRELRRGW-TIDRKGMEAG 123

Query: 126 AREVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQV 185
             EV+ RL   F      V +LS  +RQ V IARA+   A+IL+MDEPT  L  +ET ++
Sbjct: 124 CIEVLQRLGAEFTPATR-VSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRETDRL 182

Query: 186 GDLVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGMIILG 245
             L+K+L+ QG+ I  ISH + ++++L+DRV V+++G+ +G   T +    EVL  +++G
Sbjct: 183 FALIKQLRSQGLAIIYISHRMAEIYELSDRVSVLRDGQYIGEL-TREALSAEVLVKMMVG 241

Query: 246 KVPAG------AVAGPGAVV 259
           +  +G      A   PG VV
Sbjct: 242 RDLSGFYKKEHAAYNPGNVV 261



 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 63/231 (27%), Positives = 118/231 (51%), Gaps = 18/231 (7%)

Query: 24  VENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEILINGEDA-DIRNPRDAKK 82
           V N S DL  GEV+ + G  GAG++ L +++  A  R  G + + G+    +R P DA +
Sbjct: 273 VRNCSFDLHAGEVLGIAGLVGAGRTELARLIFAADPRTSGTLEVVGKTVTQLRTPADAIR 332

Query: 83  YGI---------ETIYQTLAVADNVDAAANLYLGRELKTKWGTLDDVAMEASAREVMGRL 133
            G+         + ++  ++VADN++  A +          G LD       A + +  L
Sbjct: 333 AGVVYLTEDRKAQGLFLDMSVADNINVCACVPDAHA-----GVLDRGHAAQRATDAIKSL 387

Query: 134 NPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGDLVKELK 193
           +      K  V ALSGG +Q V +AR +     +LI+DEPT  +     +++  ++ +L 
Sbjct: 388 SIRVASGKVNVGALSGGNQQKVLLARLLEVKPHVLILDEPTRGVDIGSKSEIYRIINQLA 447

Query: 194 RQGIGIFLISHDIHDVFDLADRVFVMKNGKV---VGHARTEDVTKDEVLGM 241
           + G+GI +IS ++ ++    DRV +M+ G++   VG A  + ++++ ++ +
Sbjct: 448 QAGVGIVVISSELPEIIGTCDRVLIMREGQLVAEVGGASGQVISQERIIDL 498