Pairwise Alignments

Query, 260 a.a., xylose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 501 a.a., fused D-ribose transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  172 bits (435), Expect = 2e-47
 Identities = 86/236 (36%), Positives = 151/236 (63%), Gaps = 1/236 (0%)

Query: 8   LVEMRNISISFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEILI 67
           L++++ I  +F G+ A+  A+++++PG V+AL+G NGAGKST++K+L+G Y RD G +L 
Sbjct: 4   LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLW 63

Query: 68  NGEDADIRNPRDAKKYGIETIYQTLAVADNVDAAANLYLGRELKTKWGTLDDVAMEASAR 127
            G++     P+ +++ GI  I+Q L +   +  A N++LGRE   ++G +D   M A A 
Sbjct: 64  LGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEAD 123

Query: 128 EVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGD 187
           +++ +LN  F+  K  V  LS G +Q V IA+ + F+++++IMDEPT AL   ET  +  
Sbjct: 124 KLLAKLNLRFKSDK-LVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFR 182

Query: 188 LVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGMII 243
           +++ELK QG GI  ISH + ++F++ D V V ++G+ +       +T+D ++ M++
Sbjct: 183 VIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMV 238



 Score =  106 bits (264), Expect = 1e-27
 Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 14/233 (6%)

Query: 24  VENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEILINGEDADIRNPRDAKKY 83
           V + S  L  GE++ + G  GAG++ L+K+L GA  R  G + ++G +   R+P+D    
Sbjct: 268 VNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLAN 327

Query: 84  GIETIYQT---------LAVADNVDAAANLYLGRELKTKWGTLDDVAMEASAREVMGRLN 134
           GI  I +          ++V +N+   A  Y  R      G+L     + +  + +   N
Sbjct: 328 GIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRA----GGSLKHADEQQAVSDFIRLFN 383

Query: 135 PNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGDLVKELKR 194
                 ++ +  LSGG +Q VAIAR ++   ++LI+DEPT  +      ++  L+ + K 
Sbjct: 384 VKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKA 443

Query: 195 QGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGMIILGKV 247
            G+ I L+S ++ +V  ++DR+ VM  G + G    E  T+ EVL    +GK+
Sbjct: 444 DGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQ-EVLMAAAVGKL 495