Pairwise Alignments

Query, 260 a.a., xylose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 506 a.a., Ribose import ATP-binding protein RbsA from Escherichia coli ECRC98

 Score =  188 bits (477), Expect = 2e-52
 Identities = 99/238 (41%), Positives = 159/238 (66%), Gaps = 2/238 (0%)

Query: 6   TPLVEMRNISISFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEI 65
           TP++EMRNI+ +FG  +A++   + ++PGE+ AL+G NGAGKSTL+K+L+GAY    GEI
Sbjct: 4   TPVLEMRNIAKAFGKFYALKGVDLTVYPGEIHALMGENGAGKSTLMKVLAGAYTATSGEI 63

Query: 66  LINGEDADIRNPRDAKKYGIETIYQTLAVADNVDAAANLYLGRELKTKWGTLDDVAMEAS 125
           LI+G+   IR P+DA   GI  IYQ + +A N+  A N++LG EL +  G +    M   
Sbjct: 64  LIDGKPFHIRTPKDALSAGITLIYQEMQLAPNLSVAENIFLGSEL-SHGGLVQRKEMLVQ 122

Query: 126 AREVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQV 185
           A++V+ RL   F    + V  L+  ++Q V IARA+  ++RIL+MDEPTAAL  +ET ++
Sbjct: 123 AQKVIDRLGAQFNA-SDKVMTLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETHRL 181

Query: 186 GDLVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGMII 243
            +L+  L+ +G+ I  ISH + +V++L+DRV V+++G+ VG    +++   E++ M++
Sbjct: 182 FELIMRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDNLNAGELVRMMV 239



 Score =  109 bits (272), Expect = 1e-28
 Identities = 61/225 (27%), Positives = 120/225 (53%), Gaps = 14/225 (6%)

Query: 24  VENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEILINGEDADIRNPRDAKKY 83
           V+ +S+ +  GE+V L G  GAG+S L +++ G  +  GG I ++GE   I +PR+A   
Sbjct: 271 VQPSSLLVRSGEIVGLAGLVGAGRSELAQLIFGVRKATGGMIEVDGEPVVIHSPREAIDL 330

Query: 84  GI---------ETIYQTLAVADNVDAAANLYLGRELKTKWGTLDDVAMEASAREVMGRLN 134
           GI         + ++  +A A+N+  A       E   +WG L+    +  + + +  LN
Sbjct: 331 GIGFLTENRKEQGLFLEMAAAENITMAT-----LERDARWGMLNRKKAQTISDDAIKLLN 385

Query: 135 PNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGDLVKELKR 194
                 +     LSGG +Q + I+R +    RIL++DEP   +     +++  ++ E+ R
Sbjct: 386 IRVPHAQVRAGGLSGGNQQKLLISRWVAIGPRILLLDEPARGVDVGAKSEIYRIMNEMAR 445

Query: 195 QGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVL 239
           +G+ I +IS ++ ++  ++DRV+VM+ G + G    +++T++ ++
Sbjct: 446 KGVAILMISSELPEIVGMSDRVYVMREGSIAGELNGKNITQENIM 490