Pairwise Alignments

Query, 260 a.a., xylose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 500 a.a., Galactofuranose transporter ATP-binding protein YtfR from Escherichia coli ECRC62

 Score =  162 bits (411), Expect = 1e-44
 Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 2/242 (0%)

Query: 2   TDQVTPLVEMRNISISFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRD 61
           TDQ   ++    +S  F G+ A++N    L  GE++ALLG NGAGKSTLIK L+G Y  D
Sbjct: 3   TDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHAD 62

Query: 62  GGEILINGEDADIRNPRDAKKYGIETIYQTLAVADNVDAAANLYLGRELKTKWGTLDDVA 121
            G I + G+    +N   A++ GI T+YQ + +  N+  A NL++GRE K ++G L    
Sbjct: 63  RGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPK-RFGFLRRKE 121

Query: 122 MEASAREVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQE 181
           ME  A E+M     +    +EP+   S   +Q VAI RAI   A++LI+DEPTA+L  QE
Sbjct: 122 MEKRATELMTSYGFSL-DVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQE 180

Query: 182 TAQVGDLVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGM 241
              +  L+++L+ +G+ +  ++H +  V+ ++DR+ V++NG  VG   T ++ + E++ M
Sbjct: 181 VELLFGLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETRELPQIELVKM 240

Query: 242 II 243
           ++
Sbjct: 241 ML 242



 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 58/231 (25%), Positives = 113/231 (48%), Gaps = 6/231 (2%)

Query: 17  SFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEILINGEDADIRN 76
           ++G    +    +++ PGE+V L G  G+G++   +++ G    D G  LI G+   +R+
Sbjct: 269 NYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQTLRS 328

Query: 77  PRDAKKYGIETIYQTLAVADNVDAAA----NLYLGRELKTKW-GTLDDVAMEASAREVMG 131
           P  A   GI    +     D + AAA    N+ L  + +  W   +     +  A   + 
Sbjct: 329 PHQASVLGIGFCPEDRKT-DGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIR 387

Query: 132 RLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGDLVKE 191
           +L       ++P++ LSGG +Q V ++R +L   + LI+DEPT  +     A++  L++ 
Sbjct: 388 QLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIET 447

Query: 192 LKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGMI 242
           L   G+ + +IS ++ ++   ADRV +M++ K V      +++   ++  I
Sbjct: 448 LCADGLALLVISSELEELVGYADRVIIMRDRKQVAEIPLAELSVPAIMNAI 498