Pairwise Alignments

Query, 260 a.a., xylose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Dickeya dadantii 3937

 Score =  181 bits (459), Expect = 3e-50
 Identities = 90/237 (37%), Positives = 155/237 (65%), Gaps = 1/237 (0%)

Query: 7   PLVEMRNISISFGGIHAVENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEIL 66
           PL++++ I+ +F G+ A+  A+++++PG+V+AL+G NGAGKST++K+L+G YR+D G I 
Sbjct: 3   PLLQLQGITKTFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDAGSIH 62

Query: 67  INGEDADIRNPRDAKKYGIETIYQTLAVADNVDAAANLYLGRELKTKWGTLDDVAMEASA 126
             G+D D   P+ +++ GI  I+Q L +   +  A N++LGRE   + G +D   M A A
Sbjct: 63  FLGKDVDFSGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFTNRLGRIDWKQMYAEA 122

Query: 127 REVMGRLNPNFRRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVG 186
            +++ RLN  +   +  V  LS G +Q V IA+ + F++R++IMDEPT AL   ETA + 
Sbjct: 123 DKLLKRLNLRYDS-RRLVGELSIGDQQMVEIAKVLSFESRVIIMDEPTDALTDTETASLF 181

Query: 187 DLVKELKRQGIGIFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGMII 243
            ++KEL+ QG GI  ISH + ++F++ D V V ++G+ +G     ++ +D ++ M++
Sbjct: 182 SVIKELQSQGCGIVYISHRLKEIFEICDDVTVFRDGQFIGERPVSELQEDSLIEMMV 238



 Score =  113 bits (283), Expect = 7e-30
 Identities = 65/225 (28%), Positives = 118/225 (52%), Gaps = 5/225 (2%)

Query: 24  VENASVDLFPGEVVALLGHNGAGKSTLIKILSGAYRRDGGEILINGEDADIRNPRDAKKY 83
           VEN S  L  GE++ + G  GAG++ L+K+L GA  R  G++ ++G+D   R+P+D    
Sbjct: 268 VENVSFTLRKGEILGVAGLMGAGRTELMKVLYGALPRTHGKVHLDGKDVVTRSPQDGLAS 327

Query: 84  GIETI-----YQTLAVADNVDAAANLYLGRELKTKWGTLDDVAMEASAREVMGRLNPNFR 138
           GI  I     +  L +  +V    +L   R      G+L     + +  + +   N    
Sbjct: 328 GIVYISEDRKHDGLVLGMSVKENMSLTALRYFSNAAGSLRHGDEQQAVNDFIRMFNIRTP 387

Query: 139 RFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGDLVKELKRQGIG 198
              +P+  LSGG +Q VAIAR ++   ++LI+DEPT  +      ++  L+ + K++G+ 
Sbjct: 388 SMSQPIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKQEGLS 447

Query: 199 IFLISHDIHDVFDLADRVFVMKNGKVVGHARTEDVTKDEVLGMII 243
           I L+S ++ +V  ++DR+ VM  G++ G    E  T++ ++   +
Sbjct: 448 IILVSSEMPEVLGMSDRIIVMHEGRLSGEFPIEQATQETLMAAAV 492