Pairwise Alignments

Query, 160 a.a., transcription elongation factor regulatory protein from Agrobacterium fabrum C58

Subject, 165 a.a., putative Transcription elongation factor from Pseudomonas putida KT2440

 Score = 80.5 bits (197), Expect = 1e-20
 Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 6/163 (3%)

Query: 1   MSVAFTKEDSAETAAETVLPDRVISPHLNLVTQAGLKALEQQLQLARQACEAANAIEDIN 60
           MS AF  ED A   A+  + +R IS   N VT +GL+ L+ ++           A  +  
Sbjct: 1   MSRAFVNEDQAADQADQPV-ERRISEQPNYVTASGLRQLQTRVAELNALRSELQAQGERG 59

Query: 61  ERRRLSASPLRDMRYFAERVRTAQLMPDPQADGVVAFGSLVTFSRDDGRTQRFRIVGEDE 120
           +++RL A   RD+RYF+ RV++AQ++P   +   V  GS V F     + Q  ++VGEDE
Sbjct: 60  DKQRL-ADTERDLRYFSARVQSAQVVPAATSHSKVQIGSRVRFVDAQDQEQVVQLVGEDE 118

Query: 121 ADPAAGTMSYVSPVARVLMGKTIGDVV----SLAGREIEIIDV 159
           AD   G +++ SP+ R L+G   GD V     +  + IE++++
Sbjct: 119 ADAGHGLINWGSPLGRALLGAGPGDEVVWRRPVGEQVIEVVEI 161