Pairwise Alignments

Query, 513 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 502 a.a., ribonucleotide-diphosphate reductase subunit alpha from Pseudomonas simiae WCS417

 Score =  357 bits (916), Expect = e-103
 Identities = 195/483 (40%), Positives = 295/483 (61%), Gaps = 2/483 (0%)

Query: 6   VFQARNVEKVFPGVRALKGVNLSLQPGSIHALLGENGAGKSTLIKVVTGVHHQSSGQILV 65
           + +  N+ K +PGV+ALK +NL ++ G IHALLGENGAGKSTL+K++ GV HQ  GQIL+
Sbjct: 4   LLKLENICKRYPGVQALKSINLQVERGEIHALLGENGAGKSTLMKILGGVEHQDEGQILI 63

Query: 66  DGQAVRFSNPREAIARGIGVVHQERNLIPRFSIAENIHMEKLGAHYLKPIDYAALNRDAR 125
           DGQA +F+  R+AIA GIG+V QE +LIP  +  ENI +    ++    +    +   + 
Sbjct: 64  DGQAQQFATYRDAIAAGIGIVFQEFSLIPYLTAVENIFLGHELSNRFGLLRKREMVEASE 123

Query: 126 RWLEALNLEIDPATPVSELSVAQMQLVEIAKALSLQSRVLLLDEPTTSLTPSETDNLFRI 185
              + L + ID    V  LSVA+ Q VEIAKAL+L +R+L+LDEPT +LTPSE + LF I
Sbjct: 124 ALFKRLGVTIDLQCAVKHLSVAEQQFVEIAKALALDARLLVLDEPTATLTPSEAELLFEI 183

Query: 186 LRRLRDDGASLVFVSHKLEEVLDICDRVTVLRDGENACESRSMEGLGRQDLVRLMIGRAE 245
           +R L+  G +++F+SH LEE+  +CDR++VLRDG N   +   +      LV +M+GR  
Sbjct: 184 MRELKRQGVAVIFISHHLEEIFQVCDRISVLRDGGNVGVTDVADS-DIDHLVEMMVGRRL 242

Query: 246 SGGGWRKRAVEHNPMVLELEGVSTAIGHGDVSLSVRKGEIVGLYGLVGAGRTELAKSIMG 305
           +     K   E  P++LE++ +            + KGEI+G  GLVG+GRTELA  +MG
Sbjct: 243 ACSFPPKPTRERGPLLLEVKDIQLVRNGPHNRFQLHKGEILGFAGLVGSGRTELALGMMG 302

Query: 306 KFAVTSGNVRVSGRPARIRSVAEAIHDYGVGYVSEDRKGDGLILQHSVLANAGVPIWRKL 365
                S +V + G    +   A+A+  +G+G + E RK +GLI   S+  N  +    K 
Sbjct: 303 ALPSVSKDVWLRGEKITLDDPAQALA-HGIGLLPESRKSEGLITDFSIRENISLNNLPKY 361

Query: 366 SNTFGVLSDGRIRAAVTPFLKKLEVKTPSLSQTVGNLSGGNQQKISVAKWLAADVKLLIV 425
            N  G++   R  A+V   +K+L +K PS    V NLSGGNQQK+ +A+W+     +L+ 
Sbjct: 362 QNASGLIDKNRECASVEGLMKQLSIKAPSSESRVFNLSGGNQQKVVIARWINHHCDVLVF 421

Query: 426 DEPSVGIDIKTKAYLHDLLRELADNGTAILVITSDMPEMVALADRIVVMDQYRVKGIVEN 485
           DEP+ GID+  KA ++ L+R L + G AI++I+S++PE++ + DR+ V  +  +  ++E 
Sbjct: 422 DEPTRGIDVGAKAQIYALMRSLTEQGYAIIMISSELPEIIGMCDRVAVFHKGAIVKLLEA 481

Query: 486 NGV 488
           + V
Sbjct: 482 SAV 484