Pairwise Alignments

Query, 513 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 506 a.a., Ribose import ATP-binding protein RbsA from Escherichia coli ECRC101

 Score =  343 bits (879), Expect = 1e-98
 Identities = 189/499 (37%), Positives = 307/499 (61%), Gaps = 7/499 (1%)

Query: 1   MDKQPVFQARNVEKVFPGVRALKGVNLSLQPGSIHALLGENGAGKSTLIKVVTGVHHQSS 60
           M+  PV + RN+ K F    ALKGV+L++ PG IHAL+GENGAGKSTL+KV+ G +  +S
Sbjct: 1   MNSTPVLEMRNIAKAFGKFYALKGVDLTVYPGEIHALMGENGAGKSTLMKVLAGAYTATS 60

Query: 61  GQILVDGQAVRFSNPREAIARGIGVVHQERNLIPRFSIAENIHMEKLGAHYLKPIDYAAL 120
           G+IL+DG+      P++A++ GI +++QE  L P  S+AENI +    +H    +    +
Sbjct: 61  GEILIDGKPFHIRTPKDALSAGITLIYQEMQLAPNLSVAENIFLGSELSHG-GLVQRKEM 119

Query: 121 NRDARRWLEALNLEIDPATPVSELSVAQMQLVEIAKALSLQSRVLLLDEPTTSLTPSETD 180
              A++ ++ L  + + +  V  L++A+ Q VEIA+AL   SR+L++DEPT +L+  ET 
Sbjct: 120 LVQAQKVIDRLGAQFNASDKVMTLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETH 179

Query: 181 NLFRILRRLRDDGASLVFVSHKLEEVLDICDRVTVLRDGENACESRSMEGLGRQDLVRLM 240
            LF ++ RLRD+G +++++SH++ EV ++ DRV+VLRDG+    S + + L   +LVR+M
Sbjct: 180 RLFELIMRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYV-GSLTRDNLNAGELVRMM 238

Query: 241 IGRAESGGGWRKRAVEHNPMVLELEGVSTAIGHGDVSLSVRKGEIVGLYGLVGAGRTELA 300
           +GR  S    ++R +      L +  ++        SL VR GEIVGL GLVGAGR+ELA
Sbjct: 239 VGRPLSDLFNKERDIPLGKARLNVHHLTDGGKVQPSSLLVRSGEIVGLAGLVGAGRSELA 298

Query: 301 KSIMGKFAVTSGNVRVSGRPARIRSVAEAIHDYGVGYVSEDRKGDGLILQHSVLANAGVP 360
           + I G    T G + V G P  I S  EAI D G+G+++E+RK  GL L+ +   N  + 
Sbjct: 299 QLIFGVRKATGGMIEVDGEPVVIHSPREAI-DLGIGFLTENRKEQGLFLEMAAAENITMA 357

Query: 361 IWRKLSNTFGVLSDGRIRAAVTPFLKKLEVKTPSLSQTVGNLSGGNQQKISVAKWLAADV 420
              +    +G+L+  + +      +K L ++ P      G LSGGNQQK+ +++W+A   
Sbjct: 358 TLER-DARWGMLNRKKAQTISDDAIKLLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIGP 416

Query: 421 KLLIVDEPSVGIDIKTKAYLHDLLRELADNGTAILVITSDMPEMVALADRIVVMDQYRVK 480
           ++L++DEP+ G+D+  K+ ++ ++ E+A  G AIL+I+S++PE+V ++DR+ VM +  + 
Sbjct: 417 RILLLDEPARGVDVGAKSEIYRIMNEMARKGVAILMISSELPEIVGMSDRVYVMREGSIA 476

Query: 481 GIVENNGVYADMSHDIMTL 499
           G +    +      +IMTL
Sbjct: 477 GELNGKNI---TQENIMTL 492