Pairwise Alignments

Query, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  155 bits (393), Expect = 1e-42
 Identities = 99/313 (31%), Positives = 170/313 (54%), Gaps = 15/313 (4%)

Query: 33  EFGLILLIVVFAVSFGVAAGGFLSPFNLFTLGRSAAINIMIGLSMMAVIVTGGLNLAVGA 92
           +F  ++ +++  +   + +  FL+  N + + R  ++NI I + M  VI+T G++L+VG+
Sbjct: 6   KFQSLIALIILCLVLSLLSDRFLTLANGWNVMRQVSVNICISVGMTLVILTAGIDLSVGS 65

Query: 93  I-----GVSAAMAC-GYLIEVLGVPWPLALIGGLATGAALGF----INGWTVIRTGLHSF 142
           I      V+A++   G  +E L +    A +G +  G  LGF     NGWT+ R  +  F
Sbjct: 66  ILALCGAVTASLIKNGIAVEGLNLHIGFAPLGAVILGVGLGFGLGWFNGWTITRFKVPPF 125

Query: 143 IITLATMSIFFGVMIFLTRAEAYRGLPPIFAAFGKMKLATYFSPLLLVTLVTALALSFLY 202
           + TLA ++I  G+ +  T      GL   FA  G         P+ +  ++ ALA+  L 
Sbjct: 126 VATLAMLTIARGLTMLWTGGFPINGLGEDFAFLGTGWFLGIPMPVWITAVIVALAV-LLT 184

Query: 203 RRTVLGREMLASGARPEAAELSGIRVDRIFIACHVLSGLLAALAALMLVTRTGAAIPSMA 262
           ++T  GR + A G    AA LSGI + R+ +  + ++G LAA+  +++ +R  +A P+  
Sbjct: 185 KKTKFGRYVYAIGGNERAARLSGINISRVKMTVYAIAGGLAAVGGMIVTSRLDSAQPNA- 243

Query: 263 GQLGQDWLLPAFLGPVLGGTLLQGGKVSVLGTCLGALLVTMLTSGLLLLQLGEFWVQTFL 322
              G  + L A    V+GGT L GGK +++G  LG +++ +L +GL+LL +  FW Q   
Sbjct: 244 ---GISYELDAIAAVVIGGTSLSGGKGTIMGAVLGGIIIGVLNNGLVLLNVSPFWQQVVK 300

Query: 323 GLLLLLAVLMDKA 335
           G ++LLAV++DKA
Sbjct: 301 GAVILLAVVIDKA 313