Pairwise Alignments

Query, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 325 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  214 bits (545), Expect = 2e-60
 Identities = 123/317 (38%), Positives = 187/317 (58%), Gaps = 4/317 (1%)

Query: 27  RFFLTNEFGLILLIVVFAVSFGVAAGGFLSPFNLFTLGRSAAINIMIGLSMMAVIVTGGL 86
           R   T+ FG +L+ V+  V     +  FLS FN+  L  + ++N +I  S M +I  G +
Sbjct: 9   RLARTDWFGPLLVTVMAIVVIRGFSPNFLSSFNIQILLLAISVNALIAFSQMIIIAIGQM 68

Query: 87  NLAVGAIGVSAAMACGYLIEVLGVPWPLALIGGLATGAALGFINGWTVIRTGLHSFIITL 146
           NL+VGAIG  AA++   L++V G+P P+A I  +  G   G +NG  +  TG+ +F+ITL
Sbjct: 69  NLSVGAIGGLAAISFAGLMQVWGLPAPVAAIAAMLIGIVCGMLNGLLIAITGISAFVITL 128

Query: 147 ATMSIFFGVMIFLTRAEAYRGLPPIFAAFGKMKLATYFSPLLLVTLVTALALSFLYRRTV 206
           AT+SI+ G+ + +TRAE + G+P     FG   +      L   T++ A AL F+ RR  
Sbjct: 129 ATLSIYKGINLGITRAEPFYGIPESVKDFGSALIVGPVPWLAAPTIIVAFALWFMLRRQP 188

Query: 207 LGREMLASGARPEAAELSGIRVDRIFIACHVLSGLLAALAALMLVTRTGAAIPSMAGQLG 266
           +GR +LA G    AAELSGI V    I  H +SG LA++A ++LV+R     PS    +G
Sbjct: 189 IGRFILAIGGNSHAAELSGISVRMTVIVAHGISGFLASVAGILLVSRLQIGQPS----IG 244

Query: 267 QDWLLPAFLGPVLGGTLLQGGKVSVLGTCLGALLVTMLTSGLLLLQLGEFWVQTFLGLLL 326
            DWL+ +F  PV+GG +L GG VSV  T LG ++V ++T  L+L  +  F VQ  LG ++
Sbjct: 245 DDWLILSFAAPVIGGAVLAGGHVSVGATLLGVVIVAIITQALVLFSIDPFLVQVVLGAMI 304

Query: 327 LLAVLMDKARGSYLARR 343
           L AV +++ R ++L ++
Sbjct: 305 LAAVGINRLRETHLGKK 321