Pairwise Alignments

Query, 644 a.a., diguanylate cyclase from Agrobacterium fabrum C58

Subject, 694 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  328 bits (840), Expect = 6e-94
 Identities = 186/496 (37%), Positives = 288/496 (58%), Gaps = 26/496 (5%)

Query: 141 TTLASSSVAYDVNLIDTAHEDVRKLHIVYTALAGGLILCGIALVILLLRQNDLLNRAQKS 200
           T +AS S A+D  +I   +       ++  A+ GG  +  + L++L L  +  +  AQ +
Sbjct: 191 TGMASMSFAFDPRIIIPEN-------LLPPAIMGGGAIA-VTLLLLALGLSTYVIDAQST 242

Query: 201 MRGLTDDLRAATLELQAKNVRLEHDAYHDALTGLPNRSLFRQELIERLRRSFGGTGTTAI 260
            + +                R  H + HD LTG+PNR+ F + L  R R    G  T A+
Sbjct: 243 QQAVA---------------RYRHLSLHDPLTGIPNRAAFIEHLNRRTRHISMGAHT-AL 286

Query: 261 LLLDLDGFKDVNDTLGHDAGDALLQAVAQRLSAIGGDYDMVCRLGGDEFAVVSDDLNEDA 320
           L +DLD FK++ND  GH AGDA+L+A+A R S++    + + R+GGDEF  ++      A
Sbjct: 287 LSIDLDRFKEINDVHGHAAGDAVLRAIADRASSVLKAGEFLARMGGDEFVAMTHSYYTRA 346

Query: 321 -ARRLSTKLIDQISRTYQLGEQEVKIGTCIGIAISH-GAVDADELFKRADLALYEAKAIG 378
                + +LI+QIS+  +   Q   +G  +GI++ + G++DAD L  +AD+A+Y AK+  
Sbjct: 347 DGAEFAQRLIEQISKPVEWNGQTFSVGASVGISVRNTGSIDADTLMAQADVAMYRAKSAT 406

Query: 379 PGRASVFKVRMQKQLTEKKSFEADLQTALQNDEMEVYYQPQVATQTRKLCGFEALLRWKH 438
                 +   M +    + +    +++ L N+E E+YYQ Q  T++  + GFEALLRWKH
Sbjct: 407 SDTICFYDKSMDEAARARNALAIAMRSGLANNEFELYYQQQNDTKSGSIVGFEALLRWKH 466

Query: 439 PVRGDVPPSVFIPVAERTGLIHSLGKWVMETACREAMGWDEDMKVAVNLSPVQFHSTNLI 498
           P RG V P  FIP+AE+TG I  LG+WV+  AC +A  W + + +AVN++P Q    +  
Sbjct: 467 PERGMVSPVEFIPIAEQTGFIVELGEWVLREACAQAARWKKSLAIAVNVAPQQLADNDFP 526

Query: 499 QNVMGALEKSGLEPSRLELEITESILLNKSDQTINTLSRLKAVGIKIAMDDFGTGYSSLA 558
             V   L ++GL P RLELEITE  ++      + T+ +LK++G+KIAMDD+GTGYSSL+
Sbjct: 527 DKVERILAETGLAPERLELEITEGSIIADHRHALVTIRKLKSLGVKIAMDDYGTGYSSLS 586

Query: 559 NLRGVPFDKIKIDRSFLRDITSDRDALAIVEFVVGVGRSLRMTTIAEGIETEEQYECVRR 618
            L+  PFDKIKIDR+F+  ++++  + AIV   + +  SL +  +AEG+ET+   E +RR
Sbjct: 587 TLQSFPFDKIKIDRAFIDGLSTNVQSEAIVRSTLILAHSLNIPVLAEGVETKAHIEFLRR 646

Query: 619 LGCDQVQGYLISRPLP 634
            GC QVQG+   +P P
Sbjct: 647 EGCLQVQGFFFGKPGP 662