Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 327 a.a., Ribose transport system permease protein rbsC from Escherichia coli BL21

 Score =  192 bits (488), Expect = 1e-53
 Identities = 99/297 (33%), Positives = 169/297 (56%), Gaps = 3/297 (1%)

Query: 38  ILIFIANSLASPYFLNAWNLSDATFNFTEKAIIAFAMALLIIAGEIDLSVAAIIALASTA 97
           I++ +  S +SP+F N  N+       +   I+A  +  +II   IDLS+ +++A +  A
Sbjct: 32  IILVLFFSFSSPFFFNTENIMTIALQTSVIGIMAIGVTFVIITAGIDLSLGSVVAFSGVA 91

Query: 98  MGAAVQMGVGTPGLVAIGIGTGLFCGAFNGFLVAGLKLPSIVVTIGTMSLFRGISYMVLG 157
           +G    +G+  P  +  G+  G  CG  NG LV  + +P  + T+G M   RGI+ ++  
Sbjct: 92  VGICATLGLPLPVCIIAGVLAGGMCGYVNGLLVTKMTIPPFIATLGLMMSVRGINMVMTD 151

Query: 158 DQA--YGKYPADFAYFGQGYVFWVISFEFVLFIVMAVLFAILLHATNFGRQVYVIGTNPF 215
            +A  +  YP  F    QG +F V+ +     +++A++ A +L  T  GR VY +G+N  
Sbjct: 152 GRAIYFADYPM-FKTLAQGRLFDVLPYPVFYLVIVALVGAYILKKTVIGRYVYAVGSNEV 210

Query: 216 AARFSGIPVERVKFILFLLTGLMSGIAAVCLTSRLGSTRPSIAQGWELEVVTMVVLGGVS 275
           AA  SGI V+RVK  ++   GL++GIA V L SRL S +P++  G+ELE +  VV+GG S
Sbjct: 211 AAHLSGIKVQRVKIFVYAFCGLLTGIAGVILASRLNSGQPTVGVGYELEAIAAVVIGGTS 270

Query: 276 ILGGSGTIAGVVIAAFVMGLVTFGLGLLNVPGIVMSIFVGLLLIITIAIPIVVRRLR 332
           ++GG GTI G +I AF+M ++  GL L+ V      + +G++++  + +  + +++R
Sbjct: 271 LMGGIGTIGGTIIGAFIMSVLKNGLNLMGVSQFWQMVAMGVVVVAAVYLDTLRKKIR 327