Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 325 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  176 bits (446), Expect = 7e-49
 Identities = 104/307 (33%), Positives = 168/307 (54%), Gaps = 2/307 (0%)

Query: 19  GTPLSRIMASWEVLLLGVAILIFIANSLASPYFLNAWNLSDATFNFTEKAIIAFAMALLI 78
           G   S ++ S   L L   I++ I   LAS  F +  N+ +     +   I+A  M  +I
Sbjct: 15  GFSFSAMLRSPLALPLAGLIVVSILMGLASDNFFSVNNIMNVLRQVSVVGILAVGMTFVI 74

Query: 79  IAGEIDLSVAAIIALAST-AMGAAVQMGVGTPGLVAIGIGTGLFCGAFNGFLVAGLKLPS 137
           + G IDLSV A++AL  T + G  V  G+     +  G+  GL  G FNG LVA  ++P+
Sbjct: 75  LTGGIDLSVGAVMALVGTLSAGLMVNTGLSPAIALPAGLFIGLGIGIFNGALVAWGRMPA 134

Query: 138 IVVTIGTMSLFRGISYMVLGDQAYGKYPADFAYFGQGYVFWVISFEFVLFIVMAVLFAIL 197
           I+VT+ TM + RG+  +  G       P+  ++FG G V  ++    ++ +V+  +  +L
Sbjct: 135 IIVTLATMGMARGLGLIYSGGYPVSGIPSWISWFGVGRV-GIVPVPVIIMVVIYAVAWVL 193

Query: 198 LHATNFGRQVYVIGTNPFAARFSGIPVERVKFILFLLTGLMSGIAAVCLTSRLGSTRPSI 257
           L  T FGR VY +G N  AAR SG+   RVK  ++ ++G+ +  AA+ LT RL S +P+ 
Sbjct: 194 LQRTAFGRHVYALGGNELAARLSGVKTRRVKLAVYGISGVTAAFAALILTGRLMSGQPNA 253

Query: 258 AQGWELEVVTMVVLGGVSILGGSGTIAGVVIAAFVMGLVTFGLGLLNVPGIVMSIFVGLL 317
             G+EL+ +  VVLGG +I GG G I G +I A ++G++  GL L+ +   +  +  G +
Sbjct: 254 GVGFELDAIAAVVLGGTAIAGGRGLILGTLIGAVLLGILNNGLNLMGINPYLQDVIKGGI 313

Query: 318 LIITIAI 324
           +++ I I
Sbjct: 314 ILLAIYI 320