Pairwise Alignments

Query, 333 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 329 a.a., Ribose import permease protein RbsC from Escherichia fergusonii Becca

 Score =  190 bits (482), Expect = 5e-53
 Identities = 106/304 (34%), Positives = 178/304 (58%), Gaps = 5/304 (1%)

Query: 11  LLAGIIIIMIAGFALRAPGFGRPGNLVNIFNDTSILIILALGQMAVILTKSIDLSVAANL 70
           +L+G+++++I  F+     F    N+ NI    SI+ I A G   V+L   IDLSV + +
Sbjct: 30  ILSGMVVLIIL-FSFINDSFFTANNITNIILQVSIIAITAYGMTYVLLLGDIDLSVGSTI 88

Query: 71  AFTGMAVAMTNAAFPGVPLPLLIVMAVGIGAFLGSLNGILVWWLGIPPIVVTLGTLTIYR 130
           A  G   A+   A  G+P  LL+ +++     LG +NG L    GIP  +VT+ T+ I+R
Sbjct: 89  ALIGTFAAL--GASWGIPFVLLVPLSIIAALALGMINGGLTAIAGIPSFIVTVATMGIFR 146

Query: 131 GMAFVLSGGGWVNAHQFSPTFLNVPRTMILGMPVLSWVAILIIAGAWLVLTRTSFGRSAY 190
           G+A++++ G  +        FL +     L +P+  W+ I+++     +LT+T+FGR  Y
Sbjct: 147 GIAYIVTDGMPIMIKD--DAFLALGNGEFLYIPIPIWILIILLLINHFILTKTTFGRKIY 204

Query: 191 ASGGNPGAAVYAGIDVGRTRFFAFVLSGALAGLASYLWVSRYAVAYVDIAAGFELDSVAA 250
            +GGN  AA+Y+GI+V R +   F+++  LAG++  +  SR      + A  +ELD++AA
Sbjct: 205 ITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISGMILASRLYSGQPNSALSYELDAIAA 264

Query: 251 NVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVIGISPFAQMAISGVVIVLAVVFNARA 310
            V+GG S+ GG G+V G V+GAL +GVI N + ++ +  F QM + G+VI++AV F+ R 
Sbjct: 265 AVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLMNVPYFYQMVVKGLVILVAVYFDVRN 324

Query: 311 EARK 314
           + ++
Sbjct: 325 KRKR 328