Pairwise Alignments

Query, 333 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 325 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  188 bits (478), Expect = 1e-52
 Identities = 113/296 (38%), Positives = 171/296 (57%), Gaps = 10/296 (3%)

Query: 12  LAGIIIIMIAGFALRAPGFGRPGNLVNIFNDTSILIILALGQMAVILTKSIDLSVAANLA 71
           LAG+I++ I    L +  F    N++N+    S++ ILA+G   VILT  IDLSV A +A
Sbjct: 30  LAGLIVVSIL-MGLASDNFFSVNNIMNVLRQVSVVGILAVGMTFVILTGGIDLSVGAVMA 88

Query: 72  FTGMAVA--MTNAAF-PGVPLPLLIVMAVGIGAFLGSLNGILVWWLGIPPIVVTLGTLTI 128
             G   A  M N    P + LP  + + +GIG F    NG LV W  +P I+VTL T+ +
Sbjct: 89  LVGTLSAGLMVNTGLSPAIALPAGLFIGLGIGIF----NGALVAWGRMPAIIVTLATMGM 144

Query: 129 YRGMAFVLSGGGWVNAHQFSPTFLNVPRTMILGMPVLSWVAILIIAGAWLVLTRTSFGRS 188
            RG+  + SGG  V+      ++  V R  I+ +PV+  + ++I A AW++L RT+FGR 
Sbjct: 145 ARGLGLIYSGGYPVSGIPSWISWFGVGRVGIVPVPVI--IMVVIYAVAWVLLQRTAFGRH 202

Query: 189 AYASGGNPGAAVYAGIDVGRTRFFAFVLSGALAGLASYLWVSRYAVAYVDIAAGFELDSV 248
            YA GGN  AA  +G+   R +   + +SG  A  A+ +   R      +   GFELD++
Sbjct: 203 VYALGGNELAARLSGVKTRRVKLAVYGISGVTAAFAALILTGRLMSGQPNAGVGFELDAI 262

Query: 249 AANVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVIGISPFAQMAISGVVIVLAV 304
           AA V+GG +IAGG G + G ++GA+ LG++ N L ++GI+P+ Q  I G +I+LA+
Sbjct: 263 AAVVLGGTAIAGGRGLILGTLIGAVLLGILNNGLNLMGINPYLQDVIKGGIILLAI 318