Pairwise Alignments

Query, 510 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 512 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

 Score =  386 bits (992), Expect = e-112
 Identities = 206/494 (41%), Positives = 308/494 (62%), Gaps = 4/494 (0%)

Query: 17  TPVLEMRGISQIFPGVKALDGVDIALYPGKVTALIGENGAGKSTLVKILTGIYRPNEGEI 76
           TPVLE+RGI + F   +ALDG  + +  G V  L+GENGAGKSTL+K+L GI+RP+ G +
Sbjct: 3   TPVLELRGIVKTFGATRALDGASLRVAAGSVHGLVGENGAGKSTLIKVLAGIHRPDAGSL 62

Query: 77  LLDGKAVHFHSAQDAIDAGVTAIHQETVLFDELSVGENIFLGHAPKGRFG-LIDWKTIN- 134
           LLDG+     S +     G+  IHQE +L    +VGE +F GH  + RFG L+D ++   
Sbjct: 63  LLDGQPHGHFSPRQVERLGIGFIHQERLLPARFTVGEALFFGH--ERRFGPLLDRRSQQR 120

Query: 135 ERARILLEQLESTIDPTIRLKDLSIAQRHLVAIARALSVEARIVIMDEPTAALSRKEIDD 194
           E AR+L +     +     + +LS A++ +V I RAL ++ R+++ DEP+ AL ++E++ 
Sbjct: 121 EAARLLDDYFGLRLPANALIGELSSAEQQMVQIVRALLIKPRVLVFDEPSVALVQREVER 180

Query: 195 LFRIVENLKRQGKAILFISHKFDEVYEIAENYAVFRDGKMVGAGTLATTPQDEIVRLMVG 254
           L RIV+ L+  G AI++ISH   E+  + +   V R+G+ V   +   T  ++I RLMV 
Sbjct: 181 LLRIVQRLRDDGLAIVYISHYLQEIEALCDRVTVLRNGRDVAEVSPRNTSLEQITRLMVN 240

Query: 255 RDVTNAFPKQAVTLGPTVLSVRDYSHQTEFRDISLDLRKGEILGLYGLIGAGRSELCQSL 314
           R+V   +PK AV  G  +L VR       ++ I L +R+GEI+GL GL+G+G  EL +SL
Sbjct: 241 REVGELYPKVAVPAGALLLDVRGLGRARAYQGIDLQVRRGEIVGLTGLVGSGAKELLRSL 300

Query: 315 FGITRPASGEVTLDGQPLTIRSPEDAIRAGIVYVPEERGRHGLALDMPIYQNMSLPSLTR 374
           FG+  P SGEV LDGQPL++RSP +A+  G+  +PEER R G+ALD+ + +N +L +L+R
Sbjct: 301 FGLAPPDSGEVRLDGQPLSLRSPREAVAQGVALMPEERRRQGVALDLSVQENTTLAALSR 360

Query: 375 TSRKGFLTAANEFALARKYAARLDLRAAALSVPVGTLSGGNQQKVVIGKWLATKPKVIIL 434
             R G L+ A E     +   RL ++A      V  LSGGNQQKV + KW A    + +L
Sbjct: 361 FVRLGLLSPARERHTTLELIERLRIKAHGAHAKVRQLSGGNQQKVALAKWFARCSSLYLL 420

Query: 435 DEPTKGIDIGSKAAVHGFISELAAEGLSIIMISSELPEILGMSDRAIVMREGLMAGQFER 494
           DEP+ GID+G+K  ++  I EL  EG  ++++SS+LPE++G+ DR  VM  G +A +F  
Sbjct: 421 DEPSVGIDVGAKVEIYRLIGELVKEGAGVLILSSDLPELIGLCDRIHVMHRGAIAARFAA 480

Query: 495 AEFSPEKLVRAATG 508
            E + ++L+  ATG
Sbjct: 481 GEANSDRLLAVATG 494