Pairwise Alignments

Query, 663 a.a., 3-methylcrotonyl-CoA carboxylase subunit alpha from Agrobacterium fabrum C58

Subject, 627 a.a., 3-methylcrotonyl-CoA carboxylase from Pseudomonas simiae WCS417

 Score =  509 bits (1310), Expect = e-148
 Identities = 293/660 (44%), Positives = 387/660 (58%), Gaps = 42/660 (6%)

Query: 2   FSKILIANRGEIACRIIRTAASMGIRTVAVYSDADRDAMHVALADEAIAIGPAPARASYL 61
           FSKILIANRGEIACRI RTA ++G RTVAVYSDAD  A+HV +ADEA+ IGPAP + SYL
Sbjct: 4   FSKILIANRGEIACRIQRTAQALGYRTVAVYSDADAQALHVQMADEAVHIGPAPVQQSYL 63

Query: 62  DGEKIIAAAKASGAEAIHPGYGFLSENAGFAEACASAGLVFIGPPPEAIRAMGGKSEAKA 121
           + + I+ AA+ + A+AI PGYGFLSEN  FA AC  AGL FIGP PEAI  MG K  +K 
Sbjct: 64  NIDAILNAARVTSADAIPPGYGFLSENPDFARACQQAGLTFIGPSPEAIELMGSKRLSKL 123

Query: 122 LMATAGVPIVPGYHGDEQAEKRLASEADKIGYPVLLKASAGGGGKGMRVVRQKHDFAAEL 181
            M  AGVP + GY G  Q +  L  EAD IGYP+++KASAGGGG+GMR+V+   +    L
Sbjct: 124 AMLDAGVPCIAGYQGSAQDDSTLQREADAIGYPLMIKASAGGGGRGMRLVQHPEELLDNL 183

Query: 182 AGAKREALAAFGNDRMLIEKYLERPRHVEVQVFADGHGNCVSLFERDCSIQRRHQKVIEE 241
             A+ EA  AFG+  +++E+ L  PRHVE+Q+F D HG+ + L ERDCSIQRRHQK+IEE
Sbjct: 184 HTARSEAKNAFGSGELILEQALIDPRHVEIQLFGDSHGHLIYLGERDCSIQRRHQKIIEE 243

Query: 242 APAPGLPDDLRQRMYDAATAAARAIDYRGAGTIEFLLDPSG-FYFMEMNTRLQVEHPVTE 300
           AP P +  +LRQ M +AA  A RA++Y GAGT+EFLLD +G FYF+EMNTRLQVEHPVTE
Sbjct: 244 APCPVMTPELRQAMGEAALNAGRAVNYVGAGTVEFLLDRNGRFYFLEMNTRLQVEHPVTE 303

Query: 301 YITGLDLVEWQLRVANGEALPKDWADLRINGHAIEARIYAEDPAHDFLPSIGTISHLVFP 360
            ITGLDLV+WQL++A G+ LP    D+ +NGHA+E R+YAEDPA  FLP  G +      
Sbjct: 304 LITGLDLVDWQLQIAAGQPLPLTQPDVSLNGHAMEVRLYAEDPAQGFLPQTGEVLRW--- 360

Query: 361 DEGPHLRIDSGIRAGDAITVHYDPMIAKLIVWDHDRPAAVRRLKVALEKLAICGVTSNAT 420
           D    +RID G+  G  I+  YDPM+ K+I +   R  A R+L  A+E   + GVT+N  
Sbjct: 361 DPAAGVRIDHGVTEGQRISPFYDPMLGKIIAYGATREEARRKLLRAVEDTVLLGVTTNQP 420

Query: 421 FLARLAGLETFAAADLDTGFIARNEADLFAPQAVGDNEIALAALGFLLSRKNASTNPQAQ 480
            L  L     F   D  TGFIA + +++  P       +ALAA   L  + +A+ +PQ  
Sbjct: 421 LLVDLLKHPDFVGGDFSTGFIAEHFSEI-RPLTPSAEHLALAAA--LFYQHSANQHPQGL 477

Query: 481 ADPHSPWNTANAFRLNAPARETLHFTMQNRPIDLGVAHEADSFSLEM---GGHTIRAYGD 537
           A   +  +    +RL                   G  H  ++  L +   G H    +  
Sbjct: 478 AGWRNNTSAPCTYRLEVN----------------GDTHTVNAAPLPLTTDGRHANHVFNG 521

Query: 538 LSDNGRFRATINDRTWKGYFFAESDSYALFLHGEHYRISQPDPVDIADSSGHTGGLEAPM 597
           +     +    N     G    +                +   V    ++  +G ++APM
Sbjct: 522 IRRRTAYHLVGNQLWLPGLTVTD----------------RTQQVASRQANVSSGTVKAPM 565

Query: 598 PGVIRAVLSQSGAAVETGDALVVMEAMKMEHTIRAPAKGIVTAVNCAEGDMVVAGAVLVD 657
            G I  V   +G +V  G  L+V+EAMKMEH + A   G++  V    GD V    VL++
Sbjct: 566 DGAIVDVRVSAGDSVTKGQLLLVLEAMKMEHPLTAGIDGVIKGVQVIAGDQVRNRQVLLE 625



 Score = 25.8 bits (55), Expect = 0.006
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 629 TIRAPAKGIVTAVNCAEGDMVVAGAVLVDFE 659
           T++AP  G +  V  + GD V  G +L+  E
Sbjct: 560 TVKAPMDGAIVDVRVSAGDSVTKGQLLLVLE 590