Pairwise Alignments

Query, 327 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  298 bits (762), Expect = 2e-85
 Identities = 154/322 (47%), Positives = 209/322 (64%), Gaps = 11/322 (3%)

Query: 5   TGSTLEVGLVLYRDCQIAMVHGITDLFAIASVFSQDRGG---PKLRVSHWSMGESGEFSR 61
           TG+ L++GL+LY   Q A VHG+ DLF +A+  + + G    P +RVS W   E+G+   
Sbjct: 7   TGANLDIGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVSCWQADETGQLLP 66

Query: 62  CHD----TDPGVGHPDIFVVPGRLTGPAEIEEAEPYARWLLDRHAQGATLAASCGGSFMI 117
             D    T PG+    + ++P  L    + E  E +   L   H +G  LA+ C G F I
Sbjct: 67  ASDNSAVTVPGLR---VLIIPPSLESAPQAELLERHRAPLCLLHGRGTVLASVCIGVFFI 123

Query: 118 AATGLLAARPATTHWLFAERFRERFPDVRLEIDKIVIEDGDIITAGGLMAWTDLGLRIVD 177
           AA+GLL  RPA THW +     +RFP VR+E  + +++DGDI+T+ GLMAWTDLGLR+++
Sbjct: 124 AASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRLLE 183

Query: 178 RLLGPSVMIETGKFLLIDPSGREQRHYSSFAPRLTHGDEPILKVQHWLQARAGRATSVTD 237
           R LG +V  ET ++L +DP        + F PRL HGDE +LKVQHWLQ   G+   +  
Sbjct: 184 RFLGTTVAQETARYLAVDPVAAPLPG-AVFNPRLDHGDEAVLKVQHWLQGNGGQDADLAT 242

Query: 238 MAGHAGLEERTFLRRFKAATGMKPIEYVQHLRVGKARELLEFTRRSVDQIAWSVGYEDAA 297
           MA  AGLE RTFLRRF+AATG++P EY Q +RVG+A  LLEFTRR+V+QIAW VGY+D  
Sbjct: 243 MAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQDPG 302

Query: 298 AFRRVFHRILGLSPGEYRSRFS 319
           AFR+VF R++GL+P +YR RF+
Sbjct: 303 AFRKVFQRVIGLTPSDYRRRFA 324